Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Cacna1aP97445 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cacna1aP97445 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Cacna1aP97445 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Cacna1aP97445 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.88■■□□□ 1.57
Cacna1aP97445 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Cacna1aP97445 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Cacna1aP97445 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Cacna1aP97445 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Cacna1aP97445 Gm45855-201ENSMUST00000212546 880 ntBASIC24.82■■□□□ 1.56
Cacna1aP97445 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Cacna1aP97445 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cacna1aP97445 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Cacna1aP97445 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Cacna1aP97445 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Cacna1aP97445 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cacna1aP97445 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cacna1aP97445 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cacna1aP97445 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.71■■□□□ 1.55
Cacna1aP97445 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.7■■□□□ 1.54
Cacna1aP97445 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Cacna1aP97445 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.69■■□□□ 1.54
Cacna1aP97445 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cacna1aP97445 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Cacna1aP97445 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.65■■□□□ 1.54
Cacna1aP97445 Gm9397-201ENSMUST00000200125 605 ntBASIC24.64■■□□□ 1.54
Cacna1aP97445 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cacna1aP97445 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Cacna1aP97445 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.61■■□□□ 1.53
Cacna1aP97445 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Cacna1aP97445 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cacna1aP97445 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Cacna1aP97445 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cacna1aP97445 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cacna1aP97445 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cacna1aP97445 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cacna1aP97445 Mipep-204ENSMUST00000225043 1548 ntBASIC24.57■■□□□ 1.52
Cacna1aP97445 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Cacna1aP97445 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
Cacna1aP97445 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Cacna1aP97445 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.54■■□□□ 1.52
Cacna1aP97445 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.54■■□□□ 1.52
Cacna1aP97445 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cacna1aP97445 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Cacna1aP97445 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cacna1aP97445 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cacna1aP97445 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cacna1aP97445 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.5■■□□□ 1.51
Cacna1aP97445 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cacna1aP97445 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
Cacna1aP97445 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cacna1aP97445 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cacna1aP97445 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cacna1aP97445 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Cacna1aP97445 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Cacna1aP97445 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cacna1aP97445 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.43■■□□□ 1.5
Cacna1aP97445 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.42■■□□□ 1.5
Cacna1aP97445 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cacna1aP97445 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Cacna1aP97445 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cacna1aP97445 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cacna1aP97445 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cacna1aP97445 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Cacna1aP97445 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Cacna1aP97445 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Cacna1aP97445 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.38■■□□□ 1.49
Cacna1aP97445 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cacna1aP97445 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.3■■□□□ 1.48
Cacna1aP97445 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.29■■□□□ 1.48
Cacna1aP97445 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cacna1aP97445 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Cacna1aP97445 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.25■■□□□ 1.47
Cacna1aP97445 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Cacna1aP97445 Gm24970-201ENSMUST00000175582 82 ntBASIC24.24■■□□□ 1.47
Cacna1aP97445 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.24■■□□□ 1.47
Cacna1aP97445 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Cacna1aP97445 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cacna1aP97445 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cacna1aP97445 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.22■■□□□ 1.47
Cacna1aP97445 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cacna1aP97445 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Cacna1aP97445 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cacna1aP97445 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cacna1aP97445 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.13■■□□□ 1.45
Cacna1aP97445 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.11■■□□□ 1.45
Cacna1aP97445 Gm8503-201ENSMUST00000118131 455 ntBASIC24.1■■□□□ 1.45
Cacna1aP97445 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cacna1aP97445 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Cacna1aP97445 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
Cacna1aP97445 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Cacna1aP97445 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cacna1aP97445 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cacna1aP97445 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cacna1aP97445 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.04■■□□□ 1.44
Cacna1aP97445 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cacna1aP97445 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cacna1aP97445 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Cacna1aP97445 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Cacna1aP97445 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.01■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms