Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Gcm1P70348 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Gcm1P70348 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Gcm1P70348 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.78■■□□□ 1.08
Gcm1P70348 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gcm1P70348 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Gcm1P70348 Peli2-204ENSMUST00000226513 1320 ntBASIC21.76■■□□□ 1.07
Gcm1P70348 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gcm1P70348 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gcm1P70348 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gcm1P70348 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gcm1P70348 Gm16148-201ENSMUST00000119653 893 ntBASIC21.72■■□□□ 1.07
Gcm1P70348 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gcm1P70348 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Gcm1P70348 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Gcm1P70348 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Gcm1P70348 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.7■■□□□ 1.06
Gcm1P70348 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Gcm1P70348 Zfp131-205ENSMUST00000223812 663 ntBASIC21.69■■□□□ 1.06
Gcm1P70348 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gcm1P70348 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gcm1P70348 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gcm1P70348 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gcm1P70348 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gcm1P70348 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gcm1P70348 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gcm1P70348 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Gcm1P70348 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Gcm1P70348 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Gcm1P70348 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gcm1P70348 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gcm1P70348 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.57■■□□□ 1.04
Gcm1P70348 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Gcm1P70348 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gcm1P70348 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.52■■□□□ 1.04
Gcm1P70348 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Gcm1P70348 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gcm1P70348 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.49■■□□□ 1.03
Gcm1P70348 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gcm1P70348 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Gcm1P70348 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Gcm1P70348 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Gcm1P70348 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gcm1P70348 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Gcm1P70348 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.45■■□□□ 1.02
Gcm1P70348 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Gcm1P70348 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Gcm1P70348 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gcm1P70348 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gcm1P70348 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gcm1P70348 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gcm1P70348 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.4■■□□□ 1.02
Gcm1P70348 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.39■■□□□ 1.02
Gcm1P70348 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gcm1P70348 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.38■■□□□ 1.01
Gcm1P70348 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Gcm1P70348 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Gcm1P70348 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gcm1P70348 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.33■■□□□ 1.01
Gcm1P70348 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Gcm1P70348 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.32■■□□□ 1
Gcm1P70348 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gcm1P70348 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Gcm1P70348 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gcm1P70348 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gcm1P70348 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gcm1P70348 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gcm1P70348 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gcm1P70348 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gcm1P70348 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gcm1P70348 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Gcm1P70348 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gcm1P70348 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gcm1P70348 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.23■□□□□ 0.99
Gcm1P70348 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gcm1P70348 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gcm1P70348 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gcm1P70348 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gcm1P70348 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gcm1P70348 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Gcm1P70348 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Gcm1P70348 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gcm1P70348 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gcm1P70348 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gcm1P70348 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.16■□□□□ 0.98
Gcm1P70348 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gcm1P70348 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Gcm1P70348 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.16■□□□□ 0.98
Gcm1P70348 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gcm1P70348 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gcm1P70348 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gcm1P70348 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gcm1P70348 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Gcm1P70348 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gcm1P70348 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gcm1P70348 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gcm1P70348 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gcm1P70348 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
Gcm1P70348 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gcm1P70348 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms