Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.59
Sox3P53784 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Sox3P53784 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Sox3P53784 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sox3P53784 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
Sox3P53784 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.86■■□□□ 1.57
Sox3P53784 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Sox3P53784 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Sox3P53784 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sox3P53784 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Sox3P53784 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.83■■□□□ 1.57
Sox3P53784 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.83■■□□□ 1.57
Sox3P53784 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Sox3P53784 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.82■■□□□ 1.56
Sox3P53784 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.8■■□□□ 1.56
Sox3P53784 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sox3P53784 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.79■■□□□ 1.56
Sox3P53784 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sox3P53784 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Sox3P53784 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Sox3P53784 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Sox3P53784 Gm45855-201ENSMUST00000212546 880 ntBASIC24.76■■□□□ 1.55
Sox3P53784 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Sox3P53784 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Sox3P53784 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sox3P53784 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Sox3P53784 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.73■■□□□ 1.55
Sox3P53784 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sox3P53784 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sox3P53784 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Sox3P53784 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sox3P53784 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sox3P53784 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sox3P53784 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.65■■□□□ 1.54
Sox3P53784 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sox3P53784 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Sox3P53784 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.64■■□□□ 1.54
Sox3P53784 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sox3P53784 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sox3P53784 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sox3P53784 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sox3P53784 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sox3P53784 Peli2-204ENSMUST00000226513 1320 ntBASIC24.61■■□□□ 1.53
Sox3P53784 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Sox3P53784 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Sox3P53784 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Sox3P53784 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
Sox3P53784 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Sox3P53784 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Sox3P53784 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.53■■□□□ 1.52
Sox3P53784 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sox3P53784 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sox3P53784 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Sox3P53784 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Sox3P53784 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Sox3P53784 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sox3P53784 Gm9397-201ENSMUST00000200125 605 ntBASIC24.45■■□□□ 1.5
Sox3P53784 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Sox3P53784 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Sox3P53784 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sox3P53784 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.42■■□□□ 1.5
Sox3P53784 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Sox3P53784 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sox3P53784 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sox3P53784 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Sox3P53784 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.4■■□□□ 1.5
Sox3P53784 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Sox3P53784 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Sox3P53784 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Sox3P53784 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sox3P53784 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Sox3P53784 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
Sox3P53784 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sox3P53784 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sox3P53784 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sox3P53784 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Sox3P53784 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sox3P53784 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sox3P53784 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sox3P53784 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.32■■□□□ 1.48
Sox3P53784 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sox3P53784 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Sox3P53784 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
Sox3P53784 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sox3P53784 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.29■■□□□ 1.48
Sox3P53784 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.28■■□□□ 1.48
Sox3P53784 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.26■■□□□ 1.47
Sox3P53784 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sox3P53784 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.26■■□□□ 1.47
Sox3P53784 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Sox3P53784 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sox3P53784 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Sox3P53784 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.21■■□□□ 1.47
Sox3P53784 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.21■■□□□ 1.47
Sox3P53784 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.2■■□□□ 1.46
Sox3P53784 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.2■■□□□ 1.46
Sox3P53784 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sox3P53784 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sox3P53784 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.16■■□□□ 1.46
Sox3P53784 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms