Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Sox18P43680 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25,72■■□□□ 1,71
Sox18P43680 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25,71■■□□□ 1,71
Sox18P43680 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25,71■■□□□ 1,71
Sox18P43680 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25,7■■□□□ 1,7
Sox18P43680 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25,7■■□□□ 1,7
Sox18P43680 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25,68■■□□□ 1,7
Sox18P43680 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25,68■■□□□ 1,7
Sox18P43680 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25,65■■□□□ 1,7
Sox18P43680 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25,64■■□□□ 1,7
Sox18P43680 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25,64■■□□□ 1,7
Sox18P43680 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25,63■■□□□ 1,69
Sox18P43680 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25,63■■□□□ 1,69
Sox18P43680 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25,63■■□□□ 1,69
Sox18P43680 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25,62■■□□□ 1,69
Sox18P43680 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25,62■■□□□ 1,69
Sox18P43680 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25,62■■□□□ 1,69
Sox18P43680 Gm9397-201ENSMUST00000200125 605 ntBASIC25,6■■□□□ 1,69
Sox18P43680 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25,59■■□□□ 1,69
Sox18P43680 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Sox18P43680 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Sox18P43680 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25,56■■□□□ 1,68
Sox18P43680 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25,55■■□□□ 1,68
Sox18P43680 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25,54■■□□□ 1,68
Sox18P43680 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25,53■■□□□ 1,68
Sox18P43680 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25,5■■□□□ 1,67
Sox18P43680 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25,5■■□□□ 1,67
Sox18P43680 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25,5■■□□□ 1,67
Sox18P43680 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25,49■■□□□ 1,67
Sox18P43680 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25,49■■□□□ 1,67
Sox18P43680 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25,49■■□□□ 1,67
Sox18P43680 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25,48■■□□□ 1,67
Sox18P43680 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25,47■■□□□ 1,67
Sox18P43680 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25,46■■□□□ 1,67
Sox18P43680 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25,46■■□□□ 1,67
Sox18P43680 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25,43■■□□□ 1,66
Sox18P43680 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25,42■■□□□ 1,66
Sox18P43680 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25,42■■□□□ 1,66
Sox18P43680 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25,41■■□□□ 1,66
Sox18P43680 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25,41■■□□□ 1,66
Sox18P43680 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Sox18P43680 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25,37■■□□□ 1,65
Sox18P43680 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Sox18P43680 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25,34■■□□□ 1,65
Sox18P43680 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25,34■■□□□ 1,65
Sox18P43680 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25,33■■□□□ 1,65
Sox18P43680 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25,33■■□□□ 1,65
Sox18P43680 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25,32■■□□□ 1,64
Sox18P43680 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Sox18P43680 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25,29■■□□□ 1,64
Sox18P43680 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
Sox18P43680 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
Sox18P43680 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Sox18P43680 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25,26■■□□□ 1,63
Sox18P43680 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25,26■■□□□ 1,63
Sox18P43680 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25,26■■□□□ 1,63
Sox18P43680 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25,24■■□□□ 1,63
Sox18P43680 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25,23■■□□□ 1,63
Sox18P43680 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25,22■■□□□ 1,63
Sox18P43680 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25,2■■□□□ 1,63
Sox18P43680 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25,19■■□□□ 1,62
Sox18P43680 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25,19■■□□□ 1,62
Sox18P43680 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25,18■■□□□ 1,62
Sox18P43680 Zfp131-207ENSMUST00000224946 1783 ntBASIC25,18■■□□□ 1,62
Sox18P43680 Gm24970-201ENSMUST00000175582 82 ntBASIC25,15■■□□□ 1,62
Sox18P43680 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Sox18P43680 Gm9939-201ENSMUST00000067161 1154 ntBASIC25,15■■□□□ 1,62
Sox18P43680 Gm8503-201ENSMUST00000118131 455 ntBASIC25,14■■□□□ 1,62
Sox18P43680 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25,13■■□□□ 1,61
Sox18P43680 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25,12■■□□□ 1,61
Sox18P43680 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25,11■■□□□ 1,61
Sox18P43680 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25,09■■□□□ 1,61
Sox18P43680 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25,09■■□□□ 1,61
Sox18P43680 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25,07■■□□□ 1,6
Sox18P43680 Mipep-204ENSMUST00000225043 1548 ntBASIC25,07■■□□□ 1,6
Sox18P43680 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25,05■■□□□ 1,6
Sox18P43680 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25,03■■□□□ 1,6
Sox18P43680 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25■■□□□ 1,59
Sox18P43680 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24,99■■□□□ 1,59
Sox18P43680 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24,98■■□□□ 1,59
Sox18P43680 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24,96■■□□□ 1,59
Sox18P43680 Gm6821-201ENSMUST00000107540 542 ntBASIC24,95■■□□□ 1,58
Sox18P43680 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24,94■■□□□ 1,58
Sox18P43680 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24,93■■□□□ 1,58
Sox18P43680 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24,92■■□□□ 1,58
Sox18P43680 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24,92■■□□□ 1,58
Sox18P43680 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24,91■■□□□ 1,58
Sox18P43680 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24,91■■□□□ 1,58
Sox18P43680 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24,9■■□□□ 1,58
Sox18P43680 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24,86■■□□□ 1,57
Sox18P43680 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24,86■■□□□ 1,57
Sox18P43680 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24,85■■□□□ 1,57
Sox18P43680 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24,81■■□□□ 1,56
Sox18P43680 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24,8■■□□□ 1,56
Sox18P43680 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24,8■■□□□ 1,56
Sox18P43680 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24,8■■□□□ 1,56
Sox18P43680 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24,79■■□□□ 1,56
Sox18P43680 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24,77■■□□□ 1,56
Sox18P43680 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24,76■■□□□ 1,55
Sox18P43680 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24,76■■□□□ 1,55
Retrieved 100 of 76,532 protein–RNA pairs in 15,5 ms