Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.25■□□□□ 0.99
Hmx3P42581 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmx3P42581 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hmx3P42581 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
Hmx3P42581 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.23■□□□□ 0.99
Hmx3P42581 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hmx3P42581 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmx3P42581 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmx3P42581 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmx3P42581 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmx3P42581 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmx3P42581 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmx3P42581 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmx3P42581 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Hmx3P42581 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.18■□□□□ 0.98
Hmx3P42581 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmx3P42581 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
Hmx3P42581 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmx3P42581 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hmx3P42581 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Hmx3P42581 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.15■□□□□ 0.98
Hmx3P42581 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Hmx3P42581 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmx3P42581 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmx3P42581 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmx3P42581 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmx3P42581 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmx3P42581 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hmx3P42581 Gm25262-201ENSMUST00000174934 133 ntBASIC21.11■□□□□ 0.97
Hmx3P42581 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Hmx3P42581 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmx3P42581 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmx3P42581 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmx3P42581 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmx3P42581 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmx3P42581 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmx3P42581 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.03■□□□□ 0.96
Hmx3P42581 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hmx3P42581 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmx3P42581 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.99■□□□□ 0.95
Hmx3P42581 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Hmx3P42581 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmx3P42581 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmx3P42581 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmx3P42581 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmx3P42581 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Hmx3P42581 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmx3P42581 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmx3P42581 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmx3P42581 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmx3P42581 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmx3P42581 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmx3P42581 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Hmx3P42581 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmx3P42581 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmx3P42581 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmx3P42581 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Hmx3P42581 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmx3P42581 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmx3P42581 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmx3P42581 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.84■□□□□ 0.93
Hmx3P42581 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hmx3P42581 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmx3P42581 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hmx3P42581 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hmx3P42581 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
Hmx3P42581 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Hmx3P42581 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.79■□□□□ 0.92
Hmx3P42581 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmx3P42581 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Hmx3P42581 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmx3P42581 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hmx3P42581 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmx3P42581 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hmx3P42581 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmx3P42581 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hmx3P42581 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmx3P42581 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Hmx3P42581 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.73■□□□□ 0.91
Hmx3P42581 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmx3P42581 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmx3P42581 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmx3P42581 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmx3P42581 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmx3P42581 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hmx3P42581 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Hmx3P42581 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmx3P42581 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hmx3P42581 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hmx3P42581 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmx3P42581 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmx3P42581 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.68■□□□□ 0.9
Hmx3P42581 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Hmx3P42581 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmx3P42581 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hmx3P42581 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hmx3P42581 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.65■□□□□ 0.9
Hmx3P42581 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Hmx3P42581 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hmx3P42581 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms