Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rab5cP35278 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab5cP35278 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rab5cP35278 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rab5cP35278 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rab5cP35278 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rab5cP35278 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rab5cP35278 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
Rab5cP35278 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab5cP35278 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Rab5cP35278 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rab5cP35278 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab5cP35278 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab5cP35278 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab5cP35278 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Rab5cP35278 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab5cP35278 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rab5cP35278 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.95
Rab5cP35278 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab5cP35278 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rab5cP35278 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab5cP35278 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab5cP35278 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab5cP35278 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.98■□□□□ 0.95
Rab5cP35278 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.98■□□□□ 0.95
Rab5cP35278 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab5cP35278 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.96■□□□□ 0.95
Rab5cP35278 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rab5cP35278 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab5cP35278 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rab5cP35278 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab5cP35278 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rab5cP35278 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rab5cP35278 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab5cP35278 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab5cP35278 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab5cP35278 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Rab5cP35278 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rab5cP35278 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab5cP35278 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab5cP35278 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rab5cP35278 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab5cP35278 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab5cP35278 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rab5cP35278 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab5cP35278 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rab5cP35278 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab5cP35278 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab5cP35278 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rab5cP35278 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.81■□□□□ 0.92
Rab5cP35278 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rab5cP35278 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab5cP35278 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab5cP35278 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rab5cP35278 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Rab5cP35278 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.74■□□□□ 0.91
Rab5cP35278 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rab5cP35278 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rab5cP35278 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.74■□□□□ 0.91
Rab5cP35278 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rab5cP35278 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab5cP35278 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab5cP35278 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab5cP35278 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab5cP35278 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab5cP35278 Gm27325-201ENSMUST00000175467 74 ntBASIC20.7■□□□□ 0.9
Rab5cP35278 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab5cP35278 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab5cP35278 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab5cP35278 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab5cP35278 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab5cP35278 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rab5cP35278 Amer2-203ENSMUST00000225247 2662 ntBASIC20.68■□□□□ 0.9
Rab5cP35278 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab5cP35278 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Rab5cP35278 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab5cP35278 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab5cP35278 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rab5cP35278 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rab5cP35278 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rab5cP35278 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rab5cP35278 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab5cP35278 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab5cP35278 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rab5cP35278 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.61■□□□□ 0.89
Rab5cP35278 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rab5cP35278 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
Rab5cP35278 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab5cP35278 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab5cP35278 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab5cP35278 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.57■□□□□ 0.88
Rab5cP35278 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab5cP35278 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab5cP35278 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab5cP35278 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rab5cP35278 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rab5cP35278 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab5cP35278 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab5cP35278 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab5cP35278 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms