Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hbb-b1P02088 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.37■□□□□ 0.53
Hbb-b1P02088 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hbb-b1P02088 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hbb-b1P02088 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hbb-b1P02088 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hbb-b1P02088 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hbb-b1P02088 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hbb-b1P02088 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hbb-b1P02088 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hbb-b1P02088 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.31■□□□□ 0.52
Hbb-b1P02088 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hbb-b1P02088 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hbb-b1P02088 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hbb-b1P02088 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hbb-b1P02088 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hbb-b1P02088 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hbb-b1P02088 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hbb-b1P02088 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hbb-b1P02088 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hbb-b1P02088 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hbb-b1P02088 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hbb-b1P02088 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hbb-b1P02088 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hbb-b1P02088 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Hbb-b1P02088 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hbb-b1P02088 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hbb-b1P02088 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Hbb-b1P02088 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hbb-b1P02088 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hbb-b1P02088 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hbb-b1P02088 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hbb-b1P02088 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hbb-b1P02088 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.15■□□□□ 0.5
Hbb-b1P02088 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hbb-b1P02088 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hbb-b1P02088 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Hbb-b1P02088 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hbb-b1P02088 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hbb-b1P02088 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hbb-b1P02088 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hbb-b1P02088 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hbb-b1P02088 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hbb-b1P02088 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hbb-b1P02088 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hbb-b1P02088 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hbb-b1P02088 Amer2-203ENSMUST00000225247 2662 ntBASIC18.09■□□□□ 0.49
Hbb-b1P02088 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hbb-b1P02088 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hbb-b1P02088 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hbb-b1P02088 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hbb-b1P02088 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Hbb-b1P02088 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.07■□□□□ 0.48
Hbb-b1P02088 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Hbb-b1P02088 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hbb-b1P02088 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Hbb-b1P02088 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hbb-b1P02088 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.05■□□□□ 0.48
Hbb-b1P02088 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hbb-b1P02088 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hbb-b1P02088 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Hbb-b1P02088 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.04■□□□□ 0.48
Hbb-b1P02088 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Hbb-b1P02088 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hbb-b1P02088 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Hbb-b1P02088 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Hbb-b1P02088 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hbb-b1P02088 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hbb-b1P02088 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hbb-b1P02088 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hbb-b1P02088 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hbb-b1P02088 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hbb-b1P02088 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hbb-b1P02088 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hbb-b1P02088 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hbb-b1P02088 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Hbb-b1P02088 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hbb-b1P02088 Gm24109-201ENSMUST00000175489 103 ntBASIC17.97■□□□□ 0.47
Hbb-b1P02088 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hbb-b1P02088 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hbb-b1P02088 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hbb-b1P02088 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.96■□□□□ 0.47
Hbb-b1P02088 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hbb-b1P02088 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hbb-b1P02088 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.95■□□□□ 0.46
Hbb-b1P02088 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Hbb-b1P02088 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.94■□□□□ 0.46
Hbb-b1P02088 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hbb-b1P02088 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hbb-b1P02088 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hbb-b1P02088 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hbb-b1P02088 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Hbb-b1P02088 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hbb-b1P02088 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hbb-b1P02088 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hbb-b1P02088 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.89■□□□□ 0.45
Hbb-b1P02088 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hbb-b1P02088 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hbb-b1P02088 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hbb-b1P02088 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms