Protein–RNA interactions for Protein: P00397

Mtco1, Cytochrome c oxidase subunit 1, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtco1P00397 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Mtco1P00397 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
Mtco1P00397 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Mtco1P00397 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Mtco1P00397 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Mtco1P00397 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Mtco1P00397 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.24■■■□□ 2.27
Mtco1P00397 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Mtco1P00397 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Mtco1P00397 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Mtco1P00397 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.18■■■□□ 2.26
Mtco1P00397 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Mtco1P00397 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Mtco1P00397 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
Mtco1P00397 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Mtco1P00397 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.13■■■□□ 2.25
Mtco1P00397 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Mtco1P00397 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Mtco1P00397 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.09■■■□□ 2.25
Mtco1P00397 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Mtco1P00397 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Mtco1P00397 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Mtco1P00397 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
Mtco1P00397 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Mtco1P00397 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Mtco1P00397 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.02■■■□□ 2.24
Mtco1P00397 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Mtco1P00397 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Mtco1P00397 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.99■■■□□ 2.23
Mtco1P00397 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.99■■■□□ 2.23
Mtco1P00397 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Mtco1P00397 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Mtco1P00397 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.95■■■□□ 2.22
Mtco1P00397 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.95■■■□□ 2.22
Mtco1P00397 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Mtco1P00397 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Mtco1P00397 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
Mtco1P00397 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Mtco1P00397 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
Mtco1P00397 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Mtco1P00397 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Mtco1P00397 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Mtco1P00397 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.8■■■□□ 2.2
Mtco1P00397 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Mtco1P00397 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Mtco1P00397 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Mtco1P00397 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Mtco1P00397 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.76■■■□□ 2.19
Mtco1P00397 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Mtco1P00397 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Mtco1P00397 Gm45855-201ENSMUST00000212546 880 ntBASIC28.73■■■□□ 2.19
Mtco1P00397 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Mtco1P00397 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.7■■■□□ 2.19
Mtco1P00397 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Mtco1P00397 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Mtco1P00397 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Mtco1P00397 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Mtco1P00397 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.66■■■□□ 2.18
Mtco1P00397 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.64■■■□□ 2.18
Mtco1P00397 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Mtco1P00397 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Mtco1P00397 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
Mtco1P00397 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Mtco1P00397 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Mtco1P00397 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.56■■■□□ 2.16
Mtco1P00397 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Mtco1P00397 Gm9397-201ENSMUST00000200125 605 ntBASIC28.55■■■□□ 2.16
Mtco1P00397 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Mtco1P00397 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Mtco1P00397 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
Mtco1P00397 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Mtco1P00397 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Mtco1P00397 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Mtco1P00397 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Mtco1P00397 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.51■■■□□ 2.15
Mtco1P00397 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.51■■■□□ 2.15
Mtco1P00397 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.51■■■□□ 2.15
Mtco1P00397 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Mtco1P00397 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Mtco1P00397 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Mtco1P00397 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
Mtco1P00397 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.48■■■□□ 2.15
Mtco1P00397 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Mtco1P00397 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Mtco1P00397 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Mtco1P00397 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.45■■■□□ 2.14
Mtco1P00397 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Mtco1P00397 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Mtco1P00397 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Mtco1P00397 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.43■■■□□ 2.14
Mtco1P00397 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Mtco1P00397 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Mtco1P00397 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.41■■■□□ 2.14
Mtco1P00397 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Mtco1P00397 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.39■■■□□ 2.14
Mtco1P00397 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Mtco1P00397 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.13
Mtco1P00397 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Mtco1P00397 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28.37■■■□□ 2.13
Mtco1P00397 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms