Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC29.91■■■□□ 2.38
Slc6a20bO88575 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Slc6a20bO88575 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Slc6a20bO88575 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.84■■■□□ 2.37
Slc6a20bO88575 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Slc6a20bO88575 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Slc6a20bO88575 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.78■■■□□ 2.36
Slc6a20bO88575 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Slc6a20bO88575 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Slc6a20bO88575 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Slc6a20bO88575 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Slc6a20bO88575 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Slc6a20bO88575 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Slc6a20bO88575 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Slc6a20bO88575 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Slc6a20bO88575 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
Slc6a20bO88575 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.64■■■□□ 2.34
Slc6a20bO88575 Gm9397-201ENSMUST00000200125 605 ntBASIC29.64■■■□□ 2.34
Slc6a20bO88575 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Slc6a20bO88575 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Slc6a20bO88575 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
Slc6a20bO88575 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Slc6a20bO88575 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.6■■■□□ 2.33
Slc6a20bO88575 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Slc6a20bO88575 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Slc6a20bO88575 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Slc6a20bO88575 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
Slc6a20bO88575 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Slc6a20bO88575 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC29.54■■■□□ 2.32
Slc6a20bO88575 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Slc6a20bO88575 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.54■■■□□ 2.32
Slc6a20bO88575 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Slc6a20bO88575 Mipep-204ENSMUST00000225043 1548 ntBASIC29.52■■■□□ 2.32
Slc6a20bO88575 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
Slc6a20bO88575 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.49■■■□□ 2.31
Slc6a20bO88575 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.49■■■□□ 2.31
Slc6a20bO88575 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Slc6a20bO88575 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.48■■■□□ 2.31
Slc6a20bO88575 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Slc6a20bO88575 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.48■■■□□ 2.31
Slc6a20bO88575 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Slc6a20bO88575 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Slc6a20bO88575 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Slc6a20bO88575 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Slc6a20bO88575 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Slc6a20bO88575 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.43■■■□□ 2.3
Slc6a20bO88575 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
Slc6a20bO88575 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Slc6a20bO88575 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Slc6a20bO88575 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29.39■■■□□ 2.3
Slc6a20bO88575 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Slc6a20bO88575 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
Slc6a20bO88575 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Slc6a20bO88575 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.34■■■□□ 2.29
Slc6a20bO88575 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.33■■■□□ 2.29
Slc6a20bO88575 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.3■■■□□ 2.28
Slc6a20bO88575 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Slc6a20bO88575 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.26■■■□□ 2.27
Slc6a20bO88575 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Slc6a20bO88575 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Slc6a20bO88575 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.26■■■□□ 2.27
Slc6a20bO88575 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.25■■■□□ 2.27
Slc6a20bO88575 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.24■■■□□ 2.27
Slc6a20bO88575 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Slc6a20bO88575 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Slc6a20bO88575 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Slc6a20bO88575 Gm24970-201ENSMUST00000175582 82 ntBASIC29.15■■■□□ 2.26
Slc6a20bO88575 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.14■■■□□ 2.26
Slc6a20bO88575 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
Slc6a20bO88575 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
Slc6a20bO88575 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Slc6a20bO88575 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.05■■■□□ 2.24
Slc6a20bO88575 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Slc6a20bO88575 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Slc6a20bO88575 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.01■■■□□ 2.23
Slc6a20bO88575 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29■■■□□ 2.23
Slc6a20bO88575 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC29■■■□□ 2.23
Slc6a20bO88575 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.96■■■□□ 2.23
Slc6a20bO88575 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Slc6a20bO88575 Gm8503-201ENSMUST00000118131 455 ntBASIC28.95■■■□□ 2.22
Slc6a20bO88575 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Slc6a20bO88575 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.94■■■□□ 2.22
Slc6a20bO88575 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.93■■■□□ 2.22
Slc6a20bO88575 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
Slc6a20bO88575 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.92■■■□□ 2.22
Slc6a20bO88575 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
Slc6a20bO88575 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Slc6a20bO88575 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Slc6a20bO88575 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Slc6a20bO88575 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Slc6a20bO88575 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Slc6a20bO88575 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Slc6a20bO88575 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Slc6a20bO88575 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Slc6a20bO88575 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Slc6a20bO88575 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Slc6a20bO88575 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
Slc6a20bO88575 Gm6821-201ENSMUST00000107540 542 ntBASIC28.79■■■□□ 2.2
Slc6a20bO88575 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Slc6a20bO88575 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms