Protein–RNA interactions for Protein: O88572

Lrp6, Low-density lipoprotein receptor-related protein 6, mousemouse

Predictions only

Length 1,613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrp6O88572 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC36,45■■■■□ 3,43
Lrp6O88572 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC36,42■■■■□ 3,42
Lrp6O88572 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC36,42■■■■□ 3,42
Lrp6O88572 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC36,42■■■■□ 3,42
Lrp6O88572 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36,39■■■■□ 3,42
Lrp6O88572 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC36,38■■■■□ 3,41
Lrp6O88572 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC36,37■■■■□ 3,41
Lrp6O88572 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC36,36■■■■□ 3,41
Lrp6O88572 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC36,36■■■■□ 3,41
Lrp6O88572 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC36,36■■■■□ 3,41
Lrp6O88572 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC36,34■■■■□ 3,41
Lrp6O88572 Gm10524-201ENSMUST00000181931 1893 ntBASIC36,32■■■■□ 3,41
Lrp6O88572 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC36,3■■■■□ 3,4
Lrp6O88572 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36,3■■■■□ 3,4
Lrp6O88572 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC36,29■■■■□ 3,4
Lrp6O88572 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC36,28■■■■□ 3,4
Lrp6O88572 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC36,25■■■■□ 3,39
Lrp6O88572 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC36,25■■■■□ 3,39
Lrp6O88572 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC36,25■■■■□ 3,39
Lrp6O88572 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36,24■■■■□ 3,39
Lrp6O88572 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC36,23■■■■□ 3,39
Lrp6O88572 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC36,23■■■■□ 3,39
Lrp6O88572 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC36,21■■■■□ 3,39
Lrp6O88572 CT025624.2-201ENSMUST00000223609 1909 ntBASIC36,2■■■■□ 3,39
Lrp6O88572 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC36,18■■■■□ 3,38
Lrp6O88572 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC36,17■■■■□ 3,38
Lrp6O88572 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC36,16■■■■□ 3,38
Lrp6O88572 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC36,15■■■■□ 3,38
Lrp6O88572 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC36,1■■■■□ 3,37
Lrp6O88572 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC36,05■■■■□ 3,36
Lrp6O88572 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC36,05■■■■□ 3,36
Lrp6O88572 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC36,05■■■■□ 3,36
Lrp6O88572 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC36,05■■■■□ 3,36
Lrp6O88572 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC36,03■■■■□ 3,36
Lrp6O88572 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC36,01■■■■□ 3,35
Lrp6O88572 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC35,99■■■■□ 3,35
Lrp6O88572 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC35,97■■■■□ 3,35
Lrp6O88572 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35,96■■■■□ 3,35
Lrp6O88572 Gm8503-201ENSMUST00000118131 455 ntBASIC35,94■■■■□ 3,34
Lrp6O88572 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC35,92■■■■□ 3,34
Lrp6O88572 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC35,92■■■■□ 3,34
Lrp6O88572 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC35,91■■■■□ 3,34
Lrp6O88572 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC35,88■■■■□ 3,33
Lrp6O88572 Gm9939-201ENSMUST00000067161 1154 ntBASIC35,88■■■■□ 3,33
Lrp6O88572 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC35,86■■■■□ 3,33
Lrp6O88572 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC35,84■■■■□ 3,33
Lrp6O88572 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC35,79■■■■□ 3,32
Lrp6O88572 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35,79■■■■□ 3,32
Lrp6O88572 Gm24970-201ENSMUST00000175582 82 ntBASIC35,73■■■■□ 3,31
Lrp6O88572 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC35,72■■■■□ 3,31
Lrp6O88572 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC35,69■■■■□ 3,3
Lrp6O88572 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC35,69■■■■□ 3,3
Lrp6O88572 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC35,67■■■■□ 3,3
Lrp6O88572 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC35,67■■■■□ 3,3
Lrp6O88572 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35,66■■■■□ 3,3
Lrp6O88572 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC35,66■■■■□ 3,3
Lrp6O88572 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC35,65■■■■□ 3,3
Lrp6O88572 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC35,65■■■■□ 3,3
Lrp6O88572 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC35,63■■■■□ 3,29
Lrp6O88572 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC35,61■■■■□ 3,29
Lrp6O88572 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC35,59■■■■□ 3,29
Lrp6O88572 Gm6821-201ENSMUST00000107540 542 ntBASIC35,58■■■■□ 3,29
Lrp6O88572 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC35,55■■■■□ 3,28
Lrp6O88572 Zfp131-207ENSMUST00000224946 1783 ntBASIC35,51■■■■□ 3,27
Lrp6O88572 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC35,5■■■■□ 3,27
Lrp6O88572 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC35,5■■■■□ 3,27
Lrp6O88572 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC35,47■■■■□ 3,27
Lrp6O88572 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC35,45■■■■□ 3,27
Lrp6O88572 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC35,43■■■■□ 3,26
Lrp6O88572 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC35,43■■■■□ 3,26
Lrp6O88572 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC35,37■■■■□ 3,25
Lrp6O88572 Mipep-204ENSMUST00000225043 1548 ntBASIC35,32■■■■□ 3,24
Lrp6O88572 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC35,32■■■■□ 3,24
Lrp6O88572 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC35,28■■■■□ 3,24
Lrp6O88572 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC35,19■■■■□ 3,22
Lrp6O88572 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC35,19■■■■□ 3,22
Lrp6O88572 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC35,17■■■■□ 3,22
Lrp6O88572 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC35,16■■■■□ 3,22
Lrp6O88572 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC35,15■■■■□ 3,22
Lrp6O88572 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC35,15■■■■□ 3,22
Lrp6O88572 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC35,13■■■■□ 3,21
Lrp6O88572 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC35,1■■■■□ 3,21
Lrp6O88572 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC35,09■■■■□ 3,21
Lrp6O88572 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC35,07■■■■□ 3,21
Lrp6O88572 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC35,07■■■■□ 3,21
Lrp6O88572 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC35,06■■■■□ 3,2
Lrp6O88572 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC35,05■■■■□ 3,2
Lrp6O88572 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC35,04■■■■□ 3,2
Lrp6O88572 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC35,04■■■■□ 3,2
Lrp6O88572 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC35,03■■■■□ 3,2
Lrp6O88572 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC35,02■■■■□ 3,2
Lrp6O88572 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC35,02■■■■□ 3,2
Lrp6O88572 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC35,02■■■■□ 3,2
Lrp6O88572 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC34,98■■■■□ 3,19
Lrp6O88572 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC34,98■■■■□ 3,19
Lrp6O88572 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC34,95■■■■□ 3,19
Lrp6O88572 Gm42809-201ENSMUST00000198429 1138 ntBASIC34,95■■■■□ 3,19
Lrp6O88572 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC34,95■■■■□ 3,19
Lrp6O88572 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34,94■■■■□ 3,18
Lrp6O88572 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC34,94■■■■□ 3,18
Retrieved 100 of 76,532 protein–RNA pairs in 38,2 ms