Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 AL845457.1-201ENSMUST00000197244 68 ntBASIC26,4■■□□□ 1,82
Abca4O35600 Gm9397-201ENSMUST00000200125 605 ntBASIC26,39■■□□□ 1,82
Abca4O35600 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26,39■■□□□ 1,81
Abca4O35600 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26,34■■□□□ 1,81
Abca4O35600 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26,33■■□□□ 1,81
Abca4O35600 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26,31■■□□□ 1,8
Abca4O35600 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26,3■■□□□ 1,8
Abca4O35600 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26,3■■□□□ 1,8
Abca4O35600 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26,27■■□□□ 1,8
Abca4O35600 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26,25■■□□□ 1,79
Abca4O35600 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26,25■■□□□ 1,79
Abca4O35600 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26,25■■□□□ 1,79
Abca4O35600 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26,23■■□□□ 1,79
Abca4O35600 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26,21■■□□□ 1,79
Abca4O35600 Gm8503-201ENSMUST00000118131 455 ntBASIC26,2■■□□□ 1,78
Abca4O35600 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26,17■■□□□ 1,78
Abca4O35600 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26,17■■□□□ 1,78
Abca4O35600 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26,15■■□□□ 1,78
Abca4O35600 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26,15■■□□□ 1,78
Abca4O35600 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26,14■■□□□ 1,78
Abca4O35600 Gm42596-201ENSMUST00000196305 1958 ntBASIC26,13■■□□□ 1,77
Abca4O35600 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26,12■■□□□ 1,77
Abca4O35600 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26,11■■□□□ 1,77
Abca4O35600 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26,11■■□□□ 1,77
Abca4O35600 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26,09■■□□□ 1,77
Abca4O35600 Gm9939-201ENSMUST00000067161 1154 ntBASIC26,09■■□□□ 1,77
Abca4O35600 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26,05■■□□□ 1,76
Abca4O35600 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26,05■■□□□ 1,76
Abca4O35600 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
Abca4O35600 Gm10524-201ENSMUST00000181931 1893 ntBASIC26,03■■□□□ 1,76
Abca4O35600 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Abca4O35600 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25,99■■□□□ 1,75
Abca4O35600 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25,97■■□□□ 1,75
Abca4O35600 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
Abca4O35600 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25,95■■□□□ 1,74
Abca4O35600 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25,95■■□□□ 1,74
Abca4O35600 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25,93■■□□□ 1,74
Abca4O35600 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25,93■■□□□ 1,74
Abca4O35600 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25,92■■□□□ 1,74
Abca4O35600 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25,89■■□□□ 1,74
Abca4O35600 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25,88■■□□□ 1,73
Abca4O35600 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25,86■■□□□ 1,73
Abca4O35600 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25,85■■□□□ 1,73
Abca4O35600 Gm24970-201ENSMUST00000175582 82 ntBASIC25,82■■□□□ 1,72
Abca4O35600 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Abca4O35600 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Abca4O35600 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25,81■■□□□ 1,72
Abca4O35600 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25,8■■□□□ 1,72
Abca4O35600 Gm6821-201ENSMUST00000107540 542 ntBASIC25,8■■□□□ 1,72
Abca4O35600 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25,78■■□□□ 1,72
Abca4O35600 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25,75■■□□□ 1,71
Abca4O35600 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
Abca4O35600 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25,73■■□□□ 1,71
Abca4O35600 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25,72■■□□□ 1,71
Abca4O35600 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25,71■■□□□ 1,71
Abca4O35600 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25,69■■□□□ 1,7
Abca4O35600 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25,67■■□□□ 1,7
Abca4O35600 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25,65■■□□□ 1,7
Abca4O35600 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25,65■■□□□ 1,7
Abca4O35600 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25,64■■□□□ 1,7
Abca4O35600 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25,63■■□□□ 1,69
Abca4O35600 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25,63■■□□□ 1,69
Abca4O35600 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25,61■■□□□ 1,69
Abca4O35600 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25,61■■□□□ 1,69
Abca4O35600 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25,58■■□□□ 1,69
Abca4O35600 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25,58■■□□□ 1,69
Abca4O35600 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25,58■■□□□ 1,69
Abca4O35600 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25,56■■□□□ 1,68
Abca4O35600 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25,52■■□□□ 1,68
Abca4O35600 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25,52■■□□□ 1,68
Abca4O35600 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25,52■■□□□ 1,68
Abca4O35600 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25,51■■□□□ 1,67
Abca4O35600 Zfp131-207ENSMUST00000224946 1783 ntBASIC25,51■■□□□ 1,67
Abca4O35600 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25,51■■□□□ 1,67
Abca4O35600 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25,49■■□□□ 1,67
Abca4O35600 Gm7432-201ENSMUST00000210343 879 ntBASIC25,47■■□□□ 1,67
Abca4O35600 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25,47■■□□□ 1,67
Abca4O35600 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25,47■■□□□ 1,67
Abca4O35600 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25,45■■□□□ 1,66
Abca4O35600 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25,45■■□□□ 1,66
Abca4O35600 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25,45■■□□□ 1,66
Abca4O35600 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25,43■■□□□ 1,66
Abca4O35600 Gm42809-201ENSMUST00000198429 1138 ntBASIC25,43■■□□□ 1,66
Abca4O35600 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25,42■■□□□ 1,66
Abca4O35600 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25,42■■□□□ 1,66
Abca4O35600 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25,4■■□□□ 1,66
Abca4O35600 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Abca4O35600 Mir6538-201ENSMUST00000183713 110 ntBASIC25,34■■□□□ 1,65
Abca4O35600 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25,33■■□□□ 1,65
Abca4O35600 Cap2-205ENSMUST00000225824 1634 ntBASIC25,33■■□□□ 1,64
Abca4O35600 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Abca4O35600 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25,32■■□□□ 1,64
Abca4O35600 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25,32■■□□□ 1,64
Abca4O35600 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25,32■■□□□ 1,64
Abca4O35600 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25,32■■□□□ 1,64
Abca4O35600 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25,31■■□□□ 1,64
Abca4O35600 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25,31■■□□□ 1,64
Abca4O35600 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25,3■■□□□ 1,64
Abca4O35600 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25,29■■□□□ 1,64
Abca4O35600 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25,28■■□□□ 1,64
Retrieved 100 of 76,532 protein–RNA pairs in 12,7 ms