Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.4■■□□□ 1.82
Abca4O35600 Gm9397-201ENSMUST00000200125 605 ntBASIC26.39■■□□□ 1.82
Abca4O35600 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Abca4O35600 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.34■■□□□ 1.81
Abca4O35600 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.33■■□□□ 1.81
Abca4O35600 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.31■■□□□ 1.8
Abca4O35600 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Abca4O35600 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Abca4O35600 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Abca4O35600 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.25■■□□□ 1.79
Abca4O35600 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Abca4O35600 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Abca4O35600 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.23■■□□□ 1.79
Abca4O35600 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Abca4O35600 Gm8503-201ENSMUST00000118131 455 ntBASIC26.2■■□□□ 1.78
Abca4O35600 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
Abca4O35600 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Abca4O35600 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Abca4O35600 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Abca4O35600 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.14■■□□□ 1.78
Abca4O35600 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.13■■□□□ 1.77
Abca4O35600 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Abca4O35600 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Abca4O35600 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Abca4O35600 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.09■■□□□ 1.77
Abca4O35600 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.09■■□□□ 1.77
Abca4O35600 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.05■■□□□ 1.76
Abca4O35600 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Abca4O35600 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Abca4O35600 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.03■■□□□ 1.76
Abca4O35600 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Abca4O35600 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Abca4O35600 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Abca4O35600 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Abca4O35600 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.95■■□□□ 1.74
Abca4O35600 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
Abca4O35600 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.93■■□□□ 1.74
Abca4O35600 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Abca4O35600 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.92■■□□□ 1.74
Abca4O35600 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Abca4O35600 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Abca4O35600 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.86■■□□□ 1.73
Abca4O35600 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.85■■□□□ 1.73
Abca4O35600 Gm24970-201ENSMUST00000175582 82 ntBASIC25.82■■□□□ 1.72
Abca4O35600 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Abca4O35600 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Abca4O35600 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Abca4O35600 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Abca4O35600 Gm6821-201ENSMUST00000107540 542 ntBASIC25.8■■□□□ 1.72
Abca4O35600 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Abca4O35600 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.75■■□□□ 1.71
Abca4O35600 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Abca4O35600 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.73■■□□□ 1.71
Abca4O35600 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
Abca4O35600 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Abca4O35600 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.69■■□□□ 1.7
Abca4O35600 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Abca4O35600 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.65■■□□□ 1.7
Abca4O35600 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Abca4O35600 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Abca4O35600 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Abca4O35600 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Abca4O35600 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Abca4O35600 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Abca4O35600 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Abca4O35600 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Abca4O35600 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Abca4O35600 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.56■■□□□ 1.68
Abca4O35600 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Abca4O35600 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.52■■□□□ 1.68
Abca4O35600 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Abca4O35600 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Abca4O35600 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.51■■□□□ 1.67
Abca4O35600 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Abca4O35600 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.49■■□□□ 1.67
Abca4O35600 Gm7432-201ENSMUST00000210343 879 ntBASIC25.47■■□□□ 1.67
Abca4O35600 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Abca4O35600 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Abca4O35600 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.45■■□□□ 1.66
Abca4O35600 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.45■■□□□ 1.66
Abca4O35600 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Abca4O35600 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
Abca4O35600 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.43■■□□□ 1.66
Abca4O35600 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
Abca4O35600 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.42■■□□□ 1.66
Abca4O35600 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.4■■□□□ 1.66
Abca4O35600 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Abca4O35600 Mir6538-201ENSMUST00000183713 110 ntBASIC25.34■■□□□ 1.65
Abca4O35600 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Abca4O35600 Cap2-205ENSMUST00000225824 1634 ntBASIC25.33■■□□□ 1.64
Abca4O35600 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Abca4O35600 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
Abca4O35600 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Abca4O35600 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.32■■□□□ 1.64
Abca4O35600 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Abca4O35600 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Abca4O35600 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Abca4O35600 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Abca4O35600 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Abca4O35600 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms