Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.67■□□□□ 0.42
Pkd1O08852 Gm9397-201ENSMUST00000200125 605 ntBASIC17.67■□□□□ 0.42
Pkd1O08852 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pkd1O08852 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pkd1O08852 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.64■□□□□ 0.41
Pkd1O08852 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.63■□□□□ 0.41
Pkd1O08852 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pkd1O08852 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pkd1O08852 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkd1O08852 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pkd1O08852 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pkd1O08852 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pkd1O08852 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pkd1O08852 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pkd1O08852 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pkd1O08852 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pkd1O08852 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.57■□□□□ 0.4
Pkd1O08852 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pkd1O08852 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pkd1O08852 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.55■□□□□ 0.4
Pkd1O08852 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pkd1O08852 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pkd1O08852 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pkd1O08852 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1O08852 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.54■□□□□ 0.4
Pkd1O08852 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pkd1O08852 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.51■□□□□ 0.39
Pkd1O08852 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pkd1O08852 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.5■□□□□ 0.39
Pkd1O08852 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pkd1O08852 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pkd1O08852 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pkd1O08852 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.48■□□□□ 0.39
Pkd1O08852 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Pkd1O08852 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pkd1O08852 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pkd1O08852 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pkd1O08852 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pkd1O08852 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Pkd1O08852 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.44■□□□□ 0.38
Pkd1O08852 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pkd1O08852 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pkd1O08852 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.43■□□□□ 0.38
Pkd1O08852 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkd1O08852 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.41■□□□□ 0.38
Pkd1O08852 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pkd1O08852 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pkd1O08852 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pkd1O08852 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.35■□□□□ 0.37
Pkd1O08852 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pkd1O08852 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pkd1O08852 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pkd1O08852 Gm24970-201ENSMUST00000175582 82 ntBASIC17.34■□□□□ 0.37
Pkd1O08852 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pkd1O08852 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pkd1O08852 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pkd1O08852 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pkd1O08852 Gm8503-201ENSMUST00000118131 455 ntBASIC17.31■□□□□ 0.36
Pkd1O08852 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pkd1O08852 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.3■□□□□ 0.36
Pkd1O08852 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pkd1O08852 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.25■□□□□ 0.35
Pkd1O08852 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pkd1O08852 Mipep-204ENSMUST00000225043 1548 ntBASIC17.24■□□□□ 0.35
Pkd1O08852 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pkd1O08852 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pkd1O08852 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.19■□□□□ 0.34
Pkd1O08852 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pkd1O08852 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.18■□□□□ 0.34
Pkd1O08852 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pkd1O08852 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.17■□□□□ 0.34
Pkd1O08852 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pkd1O08852 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pkd1O08852 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pkd1O08852 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pkd1O08852 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pkd1O08852 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pkd1O08852 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pkd1O08852 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC17.11■□□□□ 0.33
Pkd1O08852 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pkd1O08852 Gm6821-201ENSMUST00000107540 542 ntBASIC17.09■□□□□ 0.33
Pkd1O08852 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pkd1O08852 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pkd1O08852 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pkd1O08852 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pkd1O08852 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pkd1O08852 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pkd1O08852 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pkd1O08852 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pkd1O08852 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.04■□□□□ 0.32
Pkd1O08852 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pkd1O08852 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pkd1O08852 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.02■□□□□ 0.31
Pkd1O08852 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pkd1O08852 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pkd1O08852 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Pkd1O08852 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17■□□□□ 0.31
Pkd1O08852 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pkd1O08852 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Pkd1O08852 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms