Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ebf3O08791 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.31■■□□□ 1.96
Ebf3O08791 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Ebf3O08791 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ebf3O08791 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ebf3O08791 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
Ebf3O08791 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Ebf3O08791 Mipep-204ENSMUST00000225043 1548 ntBASIC27.25■■□□□ 1.95
Ebf3O08791 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ebf3O08791 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Ebf3O08791 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ebf3O08791 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
Ebf3O08791 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.18■■□□□ 1.94
Ebf3O08791 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ebf3O08791 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.17■■□□□ 1.94
Ebf3O08791 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Ebf3O08791 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ebf3O08791 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ebf3O08791 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Ebf3O08791 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Ebf3O08791 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.12■■□□□ 1.93
Ebf3O08791 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ebf3O08791 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ebf3O08791 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.1■■□□□ 1.93
Ebf3O08791 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ebf3O08791 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ebf3O08791 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ebf3O08791 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ebf3O08791 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Ebf3O08791 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.05■■□□□ 1.92
Ebf3O08791 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.02■■□□□ 1.92
Ebf3O08791 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.01■■□□□ 1.91
Ebf3O08791 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ebf3O08791 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ebf3O08791 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ebf3O08791 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Ebf3O08791 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ebf3O08791 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.97■■□□□ 1.91
Ebf3O08791 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Ebf3O08791 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ebf3O08791 Gm45855-201ENSMUST00000212546 880 ntBASIC26.9■■□□□ 1.9
Ebf3O08791 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Ebf3O08791 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
Ebf3O08791 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ebf3O08791 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.86■■□□□ 1.89
Ebf3O08791 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Ebf3O08791 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ebf3O08791 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.84■■□□□ 1.89
Ebf3O08791 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ebf3O08791 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ebf3O08791 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ebf3O08791 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Ebf3O08791 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Ebf3O08791 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.79■■□□□ 1.88
Ebf3O08791 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ebf3O08791 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ebf3O08791 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ebf3O08791 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.78■■□□□ 1.88
Ebf3O08791 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ebf3O08791 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ebf3O08791 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ebf3O08791 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.76■■□□□ 1.88
Ebf3O08791 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Ebf3O08791 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ebf3O08791 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ebf3O08791 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ebf3O08791 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Ebf3O08791 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.69■■□□□ 1.86
Ebf3O08791 Gm9397-201ENSMUST00000200125 605 ntBASIC26.69■■□□□ 1.86
Ebf3O08791 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.69■■□□□ 1.86
Ebf3O08791 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ebf3O08791 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Ebf3O08791 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.64■■□□□ 1.85
Ebf3O08791 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.62■■□□□ 1.85
Ebf3O08791 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ebf3O08791 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Ebf3O08791 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ebf3O08791 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.59■■□□□ 1.85
Ebf3O08791 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ebf3O08791 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ebf3O08791 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ebf3O08791 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Ebf3O08791 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ebf3O08791 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ebf3O08791 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ebf3O08791 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ebf3O08791 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ebf3O08791 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
Ebf3O08791 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ebf3O08791 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.54■■□□□ 1.84
Ebf3O08791 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ebf3O08791 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Ebf3O08791 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.52■■□□□ 1.84
Ebf3O08791 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ebf3O08791 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ebf3O08791 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Ebf3O08791 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.49■■□□□ 1.83
Ebf3O08791 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ebf3O08791 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ebf3O08791 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.46■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms