Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm9397-201ENSMUST00000200125 605 ntBASIC28.42■■■□□ 2.14
Ccdc188F6WEU2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ccdc188F6WEU2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Ccdc188F6WEU2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ccdc188F6WEU2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.36■■■□□ 2.13
Ccdc188F6WEU2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ccdc188F6WEU2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.35■■■□□ 2.13
Ccdc188F6WEU2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ccdc188F6WEU2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Ccdc188F6WEU2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ccdc188F6WEU2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.27■■■□□ 2.12
Ccdc188F6WEU2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ccdc188F6WEU2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Ccdc188F6WEU2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ccdc188F6WEU2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ccdc188F6WEU2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ccdc188F6WEU2 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.22■■■□□ 2.11
Ccdc188F6WEU2 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.21■■■□□ 2.11
Ccdc188F6WEU2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Ccdc188F6WEU2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.18■■■□□ 2.1
Ccdc188F6WEU2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Ccdc188F6WEU2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Ccdc188F6WEU2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.15■■■□□ 2.1
Ccdc188F6WEU2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Ccdc188F6WEU2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Ccdc188F6WEU2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ccdc188F6WEU2 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.12■■■□□ 2.09
Ccdc188F6WEU2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ccdc188F6WEU2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ccdc188F6WEU2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.06■■■□□ 2.08
Ccdc188F6WEU2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28.05■■■□□ 2.08
Ccdc188F6WEU2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.05■■■□□ 2.08
Ccdc188F6WEU2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.03■■■□□ 2.08
Ccdc188F6WEU2 Gm8503-201ENSMUST00000118131 455 ntBASIC28.03■■■□□ 2.08
Ccdc188F6WEU2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.02■■■□□ 2.08
Ccdc188F6WEU2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ccdc188F6WEU2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28■■■□□ 2.07
Ccdc188F6WEU2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Ccdc188F6WEU2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Ccdc188F6WEU2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.97■■■□□ 2.07
Ccdc188F6WEU2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.89■■■□□ 2.05
Ccdc188F6WEU2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
Ccdc188F6WEU2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ccdc188F6WEU2 Gm6821-201ENSMUST00000107540 542 ntBASIC27.86■■■□□ 2.05
Ccdc188F6WEU2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ccdc188F6WEU2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.85■■■□□ 2.05
Ccdc188F6WEU2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ccdc188F6WEU2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Ccdc188F6WEU2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.82■■■□□ 2.04
Ccdc188F6WEU2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ccdc188F6WEU2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ccdc188F6WEU2 Gm24970-201ENSMUST00000175582 82 ntBASIC27.78■■■□□ 2.04
Ccdc188F6WEU2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ccdc188F6WEU2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Ccdc188F6WEU2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
Ccdc188F6WEU2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
Ccdc188F6WEU2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ccdc188F6WEU2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Ccdc188F6WEU2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Ccdc188F6WEU2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ccdc188F6WEU2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Ccdc188F6WEU2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.65■■■□□ 2.02
Ccdc188F6WEU2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.64■■■□□ 2.02
Ccdc188F6WEU2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Ccdc188F6WEU2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Ccdc188F6WEU2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Ccdc188F6WEU2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
Ccdc188F6WEU2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Ccdc188F6WEU2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.53■■■□□ 2
Ccdc188F6WEU2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
Ccdc188F6WEU2 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.46■■□□□ 1.99
Ccdc188F6WEU2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Ccdc188F6WEU2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Ccdc188F6WEU2 Mipep-204ENSMUST00000225043 1548 ntBASIC27.42■■□□□ 1.98
Ccdc188F6WEU2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.42■■□□□ 1.98
Ccdc188F6WEU2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.42■■□□□ 1.98
Ccdc188F6WEU2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Ccdc188F6WEU2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ccdc188F6WEU2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ccdc188F6WEU2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Ccdc188F6WEU2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.36■■□□□ 1.97
Ccdc188F6WEU2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
Ccdc188F6WEU2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Ccdc188F6WEU2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.33■■□□□ 1.97
Ccdc188F6WEU2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.33■■□□□ 1.96
Ccdc188F6WEU2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Ccdc188F6WEU2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Ccdc188F6WEU2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Ccdc188F6WEU2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ccdc188F6WEU2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ccdc188F6WEU2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.27■■□□□ 1.96
Ccdc188F6WEU2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc188F6WEU2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.26■■□□□ 1.95
Ccdc188F6WEU2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.26■■□□□ 1.95
Ccdc188F6WEU2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ccdc188F6WEU2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ccdc188F6WEU2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Ccdc188F6WEU2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc188F6WEU2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc188F6WEU2 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.24■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms