Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
Zc3h13E9Q784 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC38.34■■■■□ 3.73
Zc3h13E9Q784 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC38.32■■■■□ 3.73
Zc3h13E9Q784 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC38.32■■■■□ 3.73
Zc3h13E9Q784 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC38.29■■■■□ 3.72
Zc3h13E9Q784 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC38.29■■■■□ 3.72
Zc3h13E9Q784 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC38.29■■■■□ 3.72
Zc3h13E9Q784 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC38.26■■■■□ 3.72
Zc3h13E9Q784 Peli2-204ENSMUST00000226513 1320 ntBASIC38.26■■■■□ 3.72
Zc3h13E9Q784 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC38.26■■■■□ 3.72
Zc3h13E9Q784 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC38.22■■■■□ 3.71
Zc3h13E9Q784 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
Zc3h13E9Q784 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
Zc3h13E9Q784 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
Zc3h13E9Q784 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
Zc3h13E9Q784 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
Zc3h13E9Q784 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
Zc3h13E9Q784 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC38.1■■■■□ 3.69
Zc3h13E9Q784 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
Zc3h13E9Q784 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
Zc3h13E9Q784 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC38.08■■■■□ 3.69
Zc3h13E9Q784 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
Zc3h13E9Q784 Gm9397-201ENSMUST00000200125 605 ntBASIC38.01■■■■□ 3.67
Zc3h13E9Q784 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
Zc3h13E9Q784 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC37.97■■■■□ 3.67
Zc3h13E9Q784 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC37.94■■■■□ 3.66
Zc3h13E9Q784 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC37.92■■■■□ 3.66
Zc3h13E9Q784 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
Zc3h13E9Q784 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC37.92■■■■□ 3.66
Zc3h13E9Q784 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC37.91■■■■□ 3.66
Zc3h13E9Q784 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
Zc3h13E9Q784 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC37.87■■■■□ 3.65
Zc3h13E9Q784 Mipep-204ENSMUST00000225043 1548 ntBASIC37.86■■■■□ 3.65
Zc3h13E9Q784 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC37.85■■■■□ 3.65
Zc3h13E9Q784 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC37.83■■■■□ 3.65
Zc3h13E9Q784 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC37.83■■■■□ 3.65
Zc3h13E9Q784 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.65
Zc3h13E9Q784 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC37.81■■■■□ 3.64
Zc3h13E9Q784 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC37.81■■■■□ 3.64
Zc3h13E9Q784 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC37.78■■■■□ 3.64
Zc3h13E9Q784 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC37.78■■■■□ 3.64
Zc3h13E9Q784 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC37.78■■■■□ 3.64
Zc3h13E9Q784 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.64
Zc3h13E9Q784 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC37.75■■■■□ 3.63
Zc3h13E9Q784 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC37.74■■■■□ 3.63
Zc3h13E9Q784 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC37.73■■■■□ 3.63
Zc3h13E9Q784 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
Zc3h13E9Q784 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
Zc3h13E9Q784 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
Zc3h13E9Q784 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
Zc3h13E9Q784 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
Zc3h13E9Q784 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC37.65■■■■□ 3.62
Zc3h13E9Q784 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC37.65■■■■□ 3.62
Zc3h13E9Q784 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
Zc3h13E9Q784 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC37.62■■■■□ 3.61
Zc3h13E9Q784 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
Zc3h13E9Q784 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC37.6■■■■□ 3.61
Zc3h13E9Q784 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC37.58■■■■□ 3.61
Zc3h13E9Q784 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC37.56■■■■□ 3.6
Zc3h13E9Q784 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC37.53■■■■□ 3.6
Zc3h13E9Q784 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
Zc3h13E9Q784 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC37.49■■■■□ 3.59
Zc3h13E9Q784 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
Zc3h13E9Q784 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC37.45■■■■□ 3.59
Zc3h13E9Q784 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC37.44■■■■□ 3.58
Zc3h13E9Q784 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC37.42■■■■□ 3.58
Zc3h13E9Q784 Gm8503-201ENSMUST00000118131 455 ntBASIC37.42■■■■□ 3.58
Zc3h13E9Q784 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC37.42■■■■□ 3.58
Zc3h13E9Q784 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC37.39■■■■□ 3.58
Zc3h13E9Q784 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
Zc3h13E9Q784 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC37.3■■■■□ 3.56
Zc3h13E9Q784 Gm24970-201ENSMUST00000175582 82 ntBASIC37.29■■■■□ 3.56
Zc3h13E9Q784 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC37.28■■■■□ 3.56
Zc3h13E9Q784 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Zc3h13E9Q784 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Zc3h13E9Q784 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
Zc3h13E9Q784 Gm9939-201ENSMUST00000067161 1154 ntBASIC37.27■■■■□ 3.56
Zc3h13E9Q784 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
Zc3h13E9Q784 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC37.22■■■■□ 3.55
Zc3h13E9Q784 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
Zc3h13E9Q784 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
Zc3h13E9Q784 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
Zc3h13E9Q784 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC37.18■■■■□ 3.54
Zc3h13E9Q784 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
Zc3h13E9Q784 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Zc3h13E9Q784 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.54
Zc3h13E9Q784 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC37.11■■■■□ 3.53
Zc3h13E9Q784 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
Zc3h13E9Q784 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
Zc3h13E9Q784 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
Zc3h13E9Q784 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
Zc3h13E9Q784 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC37.07■■■■□ 3.52
Zc3h13E9Q784 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Zc3h13E9Q784 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC36.98■■■■□ 3.51
Zc3h13E9Q784 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC36.98■■■■□ 3.51
Zc3h13E9Q784 Gm6821-201ENSMUST00000107540 542 ntBASIC36.97■■■■□ 3.51
Zc3h13E9Q784 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC36.96■■■■□ 3.51
Zc3h13E9Q784 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC36.88■■■■□ 3.5
Zc3h13E9Q784 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC36.88■■■■□ 3.49
Zc3h13E9Q784 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms