Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30,24■■■□□ 2,43
Cntnap3E9PY62 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30,24■■■□□ 2,43
Cntnap3E9PY62 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30,23■■■□□ 2,43
Cntnap3E9PY62 Peli2-204ENSMUST00000226513 1320 ntBASIC30,23■■■□□ 2,43
Cntnap3E9PY62 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30,19■■■□□ 2,42
Cntnap3E9PY62 Gm9397-201ENSMUST00000200125 605 ntBASIC30,19■■■□□ 2,42
Cntnap3E9PY62 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30,18■■■□□ 2,42
Cntnap3E9PY62 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30,17■■■□□ 2,42
Cntnap3E9PY62 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30,16■■■□□ 2,42
Cntnap3E9PY62 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
Cntnap3E9PY62 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30,11■■■□□ 2,41
Cntnap3E9PY62 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30,1■■■□□ 2,41
Cntnap3E9PY62 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30,08■■■□□ 2,41
Cntnap3E9PY62 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30,06■■■□□ 2,4
Cntnap3E9PY62 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30,06■■■□□ 2,4
Cntnap3E9PY62 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30,04■■■□□ 2,4
Cntnap3E9PY62 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30,03■■■□□ 2,4
Cntnap3E9PY62 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30,02■■■□□ 2,4
Cntnap3E9PY62 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30,02■■■□□ 2,4
Cntnap3E9PY62 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29,95■■■□□ 2,39
Cntnap3E9PY62 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29,93■■■□□ 2,38
Cntnap3E9PY62 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29,92■■■□□ 2,38
Cntnap3E9PY62 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29,92■■■□□ 2,38
Cntnap3E9PY62 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29,91■■■□□ 2,38
Cntnap3E9PY62 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29,91■■■□□ 2,38
Cntnap3E9PY62 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29,9■■■□□ 2,38
Cntnap3E9PY62 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29,89■■■□□ 2,38
Cntnap3E9PY62 Gm10524-201ENSMUST00000181931 1893 ntBASIC29,89■■■□□ 2,37
Cntnap3E9PY62 Gm42596-201ENSMUST00000196305 1958 ntBASIC29,88■■■□□ 2,37
Cntnap3E9PY62 Gm9939-201ENSMUST00000067161 1154 ntBASIC29,88■■■□□ 2,37
Cntnap3E9PY62 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29,86■■■□□ 2,37
Cntnap3E9PY62 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29,82■■■□□ 2,36
Cntnap3E9PY62 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
Cntnap3E9PY62 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29,81■■■□□ 2,36
Cntnap3E9PY62 Gm8503-201ENSMUST00000118131 455 ntBASIC29,8■■■□□ 2,36
Cntnap3E9PY62 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29,78■■■□□ 2,36
Cntnap3E9PY62 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29,75■■■□□ 2,35
Cntnap3E9PY62 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29,75■■■□□ 2,35
Cntnap3E9PY62 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29,74■■■□□ 2,35
Cntnap3E9PY62 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29,74■■■□□ 2,35
Cntnap3E9PY62 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29,72■■■□□ 2,35
Cntnap3E9PY62 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29,72■■■□□ 2,35
Cntnap3E9PY62 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29,72■■■□□ 2,35
Cntnap3E9PY62 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29,71■■■□□ 2,35
Cntnap3E9PY62 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29,71■■■□□ 2,35
Cntnap3E9PY62 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29,67■■■□□ 2,34
Cntnap3E9PY62 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29,62■■■□□ 2,33
Cntnap3E9PY62 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29,6■■■□□ 2,33
Cntnap3E9PY62 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29,59■■■□□ 2,33
Cntnap3E9PY62 Gm6821-201ENSMUST00000107540 542 ntBASIC29,58■■■□□ 2,33
Cntnap3E9PY62 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29,58■■■□□ 2,33
Cntnap3E9PY62 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29,58■■■□□ 2,33
Cntnap3E9PY62 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29,55■■■□□ 2,32
Cntnap3E9PY62 Gm24970-201ENSMUST00000175582 82 ntBASIC29,55■■■□□ 2,32
Cntnap3E9PY62 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29,55■■■□□ 2,32
Cntnap3E9PY62 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29,54■■■□□ 2,32
Cntnap3E9PY62 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29,52■■■□□ 2,32
Cntnap3E9PY62 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29,5■■■□□ 2,31
Cntnap3E9PY62 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29,5■■■□□ 2,31
Cntnap3E9PY62 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29,46■■■□□ 2,31
Cntnap3E9PY62 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29,44■■■□□ 2,3
Cntnap3E9PY62 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29,42■■■□□ 2,3
Cntnap3E9PY62 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29,4■■■□□ 2,3
Cntnap3E9PY62 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29,4■■■□□ 2,3
Cntnap3E9PY62 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29,39■■■□□ 2,3
Cntnap3E9PY62 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29,34■■■□□ 2,29
Cntnap3E9PY62 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29,34■■■□□ 2,29
Cntnap3E9PY62 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29,29■■■□□ 2,28
Cntnap3E9PY62 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29,28■■■□□ 2,28
Cntnap3E9PY62 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29,28■■■□□ 2,28
Cntnap3E9PY62 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29,27■■■□□ 2,28
Cntnap3E9PY62 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29,24■■■□□ 2,27
Cntnap3E9PY62 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
Cntnap3E9PY62 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29,22■■■□□ 2,27
Cntnap3E9PY62 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29,21■■■□□ 2,27
Cntnap3E9PY62 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29,17■■■□□ 2,26
Cntnap3E9PY62 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29,15■■■□□ 2,26
Cntnap3E9PY62 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29,15■■■□□ 2,26
Cntnap3E9PY62 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC29,12■■■□□ 2,25
Cntnap3E9PY62 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29,1■■■□□ 2,25
Cntnap3E9PY62 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29,1■■■□□ 2,25
Cntnap3E9PY62 Zfp131-207ENSMUST00000224946 1783 ntBASIC29,1■■■□□ 2,25
Cntnap3E9PY62 Mipep-204ENSMUST00000225043 1548 ntBASIC29,1■■■□□ 2,25
Cntnap3E9PY62 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29,09■■■□□ 2,25
Cntnap3E9PY62 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29,08■■■□□ 2,25
Cntnap3E9PY62 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC29,07■■■□□ 2,24
Cntnap3E9PY62 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29,07■■■□□ 2,24
Cntnap3E9PY62 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29,07■■■□□ 2,24
Cntnap3E9PY62 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29,07■■■□□ 2,24
Cntnap3E9PY62 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29,04■■■□□ 2,24
Cntnap3E9PY62 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29,04■■■□□ 2,24
Cntnap3E9PY62 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29,03■■■□□ 2,24
Cntnap3E9PY62 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29■■■□□ 2,23
Cntnap3E9PY62 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28,99■■■□□ 2,23
Cntnap3E9PY62 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28,98■■■□□ 2,23
Cntnap3E9PY62 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28,96■■■□□ 2,23
Cntnap3E9PY62 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28,96■■■□□ 2,23
Cntnap3E9PY62 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28,96■■■□□ 2,23
Cntnap3E9PY62 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28,96■■■□□ 2,23
Cntnap3E9PY62 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28,94■■■□□ 2,22
Retrieved 100 of 76,532 protein–RNA pairs in 11,6 ms