Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdh17E9PXF0 Peli2-204ENSMUST00000226513 1320 ntBASIC24.48■■□□□ 1.51
Pcdh17E9PXF0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.44■■□□□ 1.5
Pcdh17E9PXF0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Pcdh17E9PXF0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.43■■□□□ 1.5
Pcdh17E9PXF0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdh17E9PXF0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdh17E9PXF0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdh17E9PXF0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdh17E9PXF0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdh17E9PXF0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Pcdh17E9PXF0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
Pcdh17E9PXF0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdh17E9PXF0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdh17E9PXF0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdh17E9PXF0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdh17E9PXF0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Pcdh17E9PXF0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdh17E9PXF0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdh17E9PXF0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdh17E9PXF0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdh17E9PXF0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.22■■□□□ 1.47
Pcdh17E9PXF0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdh17E9PXF0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdh17E9PXF0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Pcdh17E9PXF0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.19■■□□□ 1.46
Pcdh17E9PXF0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdh17E9PXF0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Pcdh17E9PXF0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdh17E9PXF0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.17■■□□□ 1.46
Pcdh17E9PXF0 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.16■■□□□ 1.46
Pcdh17E9PXF0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Pcdh17E9PXF0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Pcdh17E9PXF0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdh17E9PXF0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.14■■□□□ 1.45
Pcdh17E9PXF0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.13■■□□□ 1.45
Pcdh17E9PXF0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdh17E9PXF0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.1■■□□□ 1.45
Pcdh17E9PXF0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdh17E9PXF0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdh17E9PXF0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdh17E9PXF0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdh17E9PXF0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdh17E9PXF0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdh17E9PXF0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdh17E9PXF0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Pcdh17E9PXF0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdh17E9PXF0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdh17E9PXF0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdh17E9PXF0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdh17E9PXF0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.95■■□□□ 1.42
Pcdh17E9PXF0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdh17E9PXF0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdh17E9PXF0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdh17E9PXF0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.91■■□□□ 1.42
Pcdh17E9PXF0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.91■■□□□ 1.42
Pcdh17E9PXF0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Pcdh17E9PXF0 Gm45855-201ENSMUST00000212546 880 ntBASIC23.89■■□□□ 1.41
Pcdh17E9PXF0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
Pcdh17E9PXF0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Pcdh17E9PXF0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdh17E9PXF0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh17E9PXF0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh17E9PXF0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.83■■□□□ 1.41
Pcdh17E9PXF0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdh17E9PXF0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdh17E9PXF0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdh17E9PXF0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
Pcdh17E9PXF0 Gm9397-201ENSMUST00000200125 605 ntBASIC23.81■■□□□ 1.4
Pcdh17E9PXF0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdh17E9PXF0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdh17E9PXF0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Pcdh17E9PXF0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Pcdh17E9PXF0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdh17E9PXF0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Pcdh17E9PXF0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh17E9PXF0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdh17E9PXF0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.77■■□□□ 1.4
Pcdh17E9PXF0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdh17E9PXF0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdh17E9PXF0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.76■■□□□ 1.39
Pcdh17E9PXF0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh17E9PXF0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdh17E9PXF0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Pcdh17E9PXF0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh17E9PXF0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.73■■□□□ 1.39
Pcdh17E9PXF0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Pcdh17E9PXF0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh17E9PXF0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.73■■□□□ 1.39
Pcdh17E9PXF0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh17E9PXF0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.71■■□□□ 1.39
Pcdh17E9PXF0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.71■■□□□ 1.39
Pcdh17E9PXF0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdh17E9PXF0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh17E9PXF0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.69■■□□□ 1.38
Pcdh17E9PXF0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh17E9PXF0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh17E9PXF0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh17E9PXF0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.66■■□□□ 1.38
Pcdh17E9PXF0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms