Protein–RNA interactions for Protein: E9PW43

Gm10320, Protein transport protein Sec61 subunit beta, mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10320E9PW43 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm10320E9PW43 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm10320E9PW43 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm10320E9PW43 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm10320E9PW43 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
Gm10320E9PW43 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Gm10320E9PW43 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC16.55■□□□□ 0.24
Gm10320E9PW43 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm10320E9PW43 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm10320E9PW43 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC16.54■□□□□ 0.24
Gm10320E9PW43 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm10320E9PW43 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm10320E9PW43 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
Gm10320E9PW43 Gm25238-201ENSMUST00000174914 89 ntBASIC16.52■□□□□ 0.24
Gm10320E9PW43 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm10320E9PW43 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.51■□□□□ 0.23
Gm10320E9PW43 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm10320E9PW43 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm10320E9PW43 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm10320E9PW43 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Gm10320E9PW43 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm10320E9PW43 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Gm10320E9PW43 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gm10320E9PW43 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm10320E9PW43 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm10320E9PW43 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm10320E9PW43 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm10320E9PW43 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Gm10320E9PW43 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gm10320E9PW43 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm10320E9PW43 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm10320E9PW43 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm10320E9PW43 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm10320E9PW43 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm10320E9PW43 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC16.43■□□□□ 0.22
Gm10320E9PW43 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm10320E9PW43 Amer2-203ENSMUST00000225247 2662 ntBASIC16.42■□□□□ 0.22
Gm10320E9PW43 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm10320E9PW43 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm10320E9PW43 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Gm10320E9PW43 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm10320E9PW43 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10320E9PW43 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10320E9PW43 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10320E9PW43 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Gm10320E9PW43 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10320E9PW43 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm10320E9PW43 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Gm10320E9PW43 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Gm10320E9PW43 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm10320E9PW43 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm10320E9PW43 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Gm10320E9PW43 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm10320E9PW43 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Gm10320E9PW43 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm10320E9PW43 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm10320E9PW43 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10320E9PW43 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10320E9PW43 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10320E9PW43 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Gm10320E9PW43 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Gm10320E9PW43 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10320E9PW43 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Gm10320E9PW43 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10320E9PW43 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10320E9PW43 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Gm10320E9PW43 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10320E9PW43 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10320E9PW43 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm10320E9PW43 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.23■□□□□ 0.19
Gm10320E9PW43 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.23■□□□□ 0.19
Gm10320E9PW43 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm10320E9PW43 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm10320E9PW43 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm10320E9PW43 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm10320E9PW43 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm10320E9PW43 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm10320E9PW43 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Gm10320E9PW43 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10320E9PW43 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC16.14■□□□□ 0.17
Gm10320E9PW43 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm10320E9PW43 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10320E9PW43 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10320E9PW43 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10320E9PW43 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Gm10320E9PW43 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gm10320E9PW43 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.13■□□□□ 0.17
Gm10320E9PW43 Mipep-204ENSMUST00000225043 1548 ntBASIC16.13■□□□□ 0.17
Gm10320E9PW43 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10320E9PW43 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10320E9PW43 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10320E9PW43 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm10320E9PW43 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10320E9PW43 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC16.11■□□□□ 0.17
Gm10320E9PW43 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm10320E9PW43 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm10320E9PW43 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm10320E9PW43 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm10320E9PW43 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm10320E9PW43 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms