Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Igkv6-25A0A140T8N7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Igkv6-25A0A140T8N7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Igkv6-25A0A140T8N7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Igkv6-25A0A140T8N7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.19■■□□□ 1.62
Igkv6-25A0A140T8N7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Igkv6-25A0A140T8N7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Igkv6-25A0A140T8N7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Igkv6-25A0A140T8N7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Igkv6-25A0A140T8N7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Igkv6-25A0A140T8N7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.15■■□□□ 1.62
Igkv6-25A0A140T8N7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Igkv6-25A0A140T8N7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Igkv6-25A0A140T8N7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Igkv6-25A0A140T8N7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.1■■□□□ 1.61
Igkv6-25A0A140T8N7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Igkv6-25A0A140T8N7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.08■■□□□ 1.61
Igkv6-25A0A140T8N7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
Igkv6-25A0A140T8N7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Igkv6-25A0A140T8N7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Igkv6-25A0A140T8N7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Igkv6-25A0A140T8N7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Igkv6-25A0A140T8N7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Igkv6-25A0A140T8N7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Igkv6-25A0A140T8N7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Igkv6-25A0A140T8N7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.97■■□□□ 1.59
Igkv6-25A0A140T8N7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Igkv6-25A0A140T8N7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Igkv6-25A0A140T8N7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.95■■□□□ 1.58
Igkv6-25A0A140T8N7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Igkv6-25A0A140T8N7 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.91■■□□□ 1.58
Igkv6-25A0A140T8N7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Igkv6-25A0A140T8N7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Igkv6-25A0A140T8N7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Igkv6-25A0A140T8N7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Igkv6-25A0A140T8N7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.85■■□□□ 1.57
Igkv6-25A0A140T8N7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Igkv6-25A0A140T8N7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Igkv6-25A0A140T8N7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
Igkv6-25A0A140T8N7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.82■■□□□ 1.56
Igkv6-25A0A140T8N7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Igkv6-25A0A140T8N7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Igkv6-25A0A140T8N7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Igkv6-25A0A140T8N7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Igkv6-25A0A140T8N7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Igkv6-25A0A140T8N7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Igkv6-25A0A140T8N7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Igkv6-25A0A140T8N7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
Igkv6-25A0A140T8N7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Igkv6-25A0A140T8N7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Igkv6-25A0A140T8N7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Igkv6-25A0A140T8N7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Igkv6-25A0A140T8N7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.71■■□□□ 1.55
Igkv6-25A0A140T8N7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.71■■□□□ 1.55
Igkv6-25A0A140T8N7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Igkv6-25A0A140T8N7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Igkv6-25A0A140T8N7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Igkv6-25A0A140T8N7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.69■■□□□ 1.54
Igkv6-25A0A140T8N7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.69■■□□□ 1.54
Igkv6-25A0A140T8N7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Igkv6-25A0A140T8N7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
Igkv6-25A0A140T8N7 Gm45855-201ENSMUST00000212546 880 ntBASIC24.64■■□□□ 1.54
Igkv6-25A0A140T8N7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Igkv6-25A0A140T8N7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Igkv6-25A0A140T8N7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Igkv6-25A0A140T8N7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Igkv6-25A0A140T8N7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Igkv6-25A0A140T8N7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Igkv6-25A0A140T8N7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Igkv6-25A0A140T8N7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.61■■□□□ 1.53
Igkv6-25A0A140T8N7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Igkv6-25A0A140T8N7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Igkv6-25A0A140T8N7 Gm9397-201ENSMUST00000200125 605 ntBASIC24.59■■□□□ 1.53
Igkv6-25A0A140T8N7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Igkv6-25A0A140T8N7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Igkv6-25A0A140T8N7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Igkv6-25A0A140T8N7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Igkv6-25A0A140T8N7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Igkv6-25A0A140T8N7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Igkv6-25A0A140T8N7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Igkv6-25A0A140T8N7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Igkv6-25A0A140T8N7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Igkv6-25A0A140T8N7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
Igkv6-25A0A140T8N7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.52■■□□□ 1.52
Igkv6-25A0A140T8N7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
Igkv6-25A0A140T8N7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.49■■□□□ 1.51
Igkv6-25A0A140T8N7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.49■■□□□ 1.51
Igkv6-25A0A140T8N7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.48■■□□□ 1.51
Igkv6-25A0A140T8N7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Igkv6-25A0A140T8N7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Igkv6-25A0A140T8N7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.47■■□□□ 1.51
Igkv6-25A0A140T8N7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Igkv6-25A0A140T8N7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.46■■□□□ 1.51
Igkv6-25A0A140T8N7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Igkv6-25A0A140T8N7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Igkv6-25A0A140T8N7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Igkv6-25A0A140T8N7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.44■■□□□ 1.5
Igkv6-25A0A140T8N7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Igkv6-25A0A140T8N7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Igkv6-25A0A140T8N7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms