Protein–RNA interactions for Protein: A0A140LJC2

Gm1043, Predicted gene 1043, mousemouse

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm1043A0A140LJC2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC41.03■■■■■ 4.16
Gm1043A0A140LJC2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC41.02■■■■■ 4.16
Gm1043A0A140LJC2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC41■■■■■ 4.15
Gm1043A0A140LJC2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC40.93■■■■■ 4.14
Gm1043A0A140LJC2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC40.92■■■■■ 4.14
Gm1043A0A140LJC2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC40.92■■■■■ 4.14
Gm1043A0A140LJC2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC40.91■■■■■ 4.14
Gm1043A0A140LJC2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC40.88■■■■■ 4.13
Gm1043A0A140LJC2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC40.87■■■■■ 4.13
Gm1043A0A140LJC2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC40.87■■■■■ 4.13
Gm1043A0A140LJC2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC40.84■■■■■ 4.13
Gm1043A0A140LJC2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC40.84■■■■■ 4.13
Gm1043A0A140LJC2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC40.84■■■■■ 4.13
Gm1043A0A140LJC2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC40.83■■■■■ 4.13
Gm1043A0A140LJC2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.12
Gm1043A0A140LJC2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
Gm1043A0A140LJC2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.11
Gm1043A0A140LJC2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC40.75■■■■■ 4.11
Gm1043A0A140LJC2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC40.75■■■■■ 4.11
Gm1043A0A140LJC2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC40.73■■■■■ 4.11
Gm1043A0A140LJC2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC40.71■■■■■ 4.11
Gm1043A0A140LJC2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC40.7■■■■■ 4.11
Gm1043A0A140LJC2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC40.7■■■■■ 4.11
Gm1043A0A140LJC2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC40.68■■■■■ 4.1
Gm1043A0A140LJC2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC40.68■■■■■ 4.1
Gm1043A0A140LJC2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC40.66■■■■■ 4.1
Gm1043A0A140LJC2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC40.66■■■■■ 4.1
Gm1043A0A140LJC2 Tdp2-203ENSMUST00000223804 1136 ntBASIC40.58■■■■■ 4.09
Gm1043A0A140LJC2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC40.57■■■■■ 4.08
Gm1043A0A140LJC2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
Gm1043A0A140LJC2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
Gm1043A0A140LJC2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC40.5■■■■■ 4.07
Gm1043A0A140LJC2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC40.49■■■■■ 4.07
Gm1043A0A140LJC2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC40.48■■■■■ 4.07
Gm1043A0A140LJC2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC40.46■■■■■ 4.07
Gm1043A0A140LJC2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC40.44■■■■■ 4.06
Gm1043A0A140LJC2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC40.44■■■■■ 4.06
Gm1043A0A140LJC2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC40.39■■■■■ 4.06
Gm1043A0A140LJC2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC40.38■■■■■ 4.05
Gm1043A0A140LJC2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC40.35■■■■■ 4.05
Gm1043A0A140LJC2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
Gm1043A0A140LJC2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC40.33■■■■■ 4.05
Gm1043A0A140LJC2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC40.29■■■■■ 4.04
Gm1043A0A140LJC2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC40.29■■■■■ 4.04
Gm1043A0A140LJC2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC40.25■■■■■ 4.03
Gm1043A0A140LJC2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC40.25■■■■■ 4.03
Gm1043A0A140LJC2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC40.25■■■■■ 4.03
Gm1043A0A140LJC2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC40.25■■■■■ 4.03
Gm1043A0A140LJC2 Gm9397-201ENSMUST00000200125 605 ntBASIC40.25■■■■■ 4.03
Gm1043A0A140LJC2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
Gm1043A0A140LJC2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC40.23■■■■■ 4.03
Gm1043A0A140LJC2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
Gm1043A0A140LJC2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC40.22■■■■■ 4.03
Gm1043A0A140LJC2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC40.21■■■■■ 4.03
Gm1043A0A140LJC2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC40.21■■■■■ 4.03
Gm1043A0A140LJC2 Gm45855-201ENSMUST00000212546 880 ntBASIC40.2■■■■■ 4.03
Gm1043A0A140LJC2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.02
Gm1043A0A140LJC2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC40.18■■■■■ 4.02
Gm1043A0A140LJC2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC40.17■■■■■ 4.02
Gm1043A0A140LJC2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC40.14■■■■■ 4.02
Gm1043A0A140LJC2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC40.13■■■■■ 4.01
Gm1043A0A140LJC2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC40.13■■■■■ 4.01
Gm1043A0A140LJC2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC40.12■■■■■ 4.01
Gm1043A0A140LJC2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC40.11■■■■■ 4.01
Gm1043A0A140LJC2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC40.09■■■■■ 4.01
Gm1043A0A140LJC2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC40.09■■■■■ 4.01
Gm1043A0A140LJC2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC40.08■■■■■ 4.01
Gm1043A0A140LJC2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC40.07■■■■■ 4.01
Gm1043A0A140LJC2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC40.06■■■■■ 4
Gm1043A0A140LJC2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC40.06■■■■■ 4
Gm1043A0A140LJC2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC40.04■■■■■ 4
Gm1043A0A140LJC2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC40.04■■■■■ 4
Gm1043A0A140LJC2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC40.03■■■■■ 4
Gm1043A0A140LJC2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■■ 4
Gm1043A0A140LJC2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■■ 4
Gm1043A0A140LJC2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC39.99■■■■□ 3.99
Gm1043A0A140LJC2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC39.99■■■■□ 3.99
Gm1043A0A140LJC2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC39.98■■■■□ 3.99
Gm1043A0A140LJC2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC39.98■■■■□ 3.99
Gm1043A0A140LJC2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
Gm1043A0A140LJC2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC39.95■■■■□ 3.99
Gm1043A0A140LJC2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
Gm1043A0A140LJC2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
Gm1043A0A140LJC2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC39.92■■■■□ 3.98
Gm1043A0A140LJC2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
Gm1043A0A140LJC2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC39.89■■■■□ 3.98
Gm1043A0A140LJC2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
Gm1043A0A140LJC2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
Gm1043A0A140LJC2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC39.84■■■■□ 3.97
Gm1043A0A140LJC2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC39.82■■■■□ 3.97
Gm1043A0A140LJC2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC39.82■■■■□ 3.97
Gm1043A0A140LJC2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC39.82■■■■□ 3.97
Gm1043A0A140LJC2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC39.81■■■■□ 3.96
Gm1043A0A140LJC2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC39.81■■■■□ 3.96
Gm1043A0A140LJC2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC39.81■■■■□ 3.96
Gm1043A0A140LJC2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC39.81■■■■□ 3.96
Gm1043A0A140LJC2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
Gm1043A0A140LJC2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
Gm1043A0A140LJC2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
Gm1043A0A140LJC2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC39.76■■■■□ 3.96
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms