Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13n-2A0A0G2JF93 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13n-2A0A0G2JF93 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav13n-2A0A0G2JF93 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13n-2A0A0G2JF93 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13n-2A0A0G2JF93 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13n-2A0A0G2JF93 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13n-2A0A0G2JF93 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13n-2A0A0G2JF93 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13n-2A0A0G2JF93 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13n-2A0A0G2JF93 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13n-2A0A0G2JF93 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13n-2A0A0G2JF93 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13n-2A0A0G2JF93 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav13n-2A0A0G2JF93 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13n-2A0A0G2JF93 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13n-2A0A0G2JF93 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13n-2A0A0G2JF93 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13n-2A0A0G2JF93 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13n-2A0A0G2JF93 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13n-2A0A0G2JF93 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13n-2A0A0G2JF93 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav13n-2A0A0G2JF93 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13n-2A0A0G2JF93 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13n-2A0A0G2JF93 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav13n-2A0A0G2JF93 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-2A0A0G2JF93 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav13n-2A0A0G2JF93 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13n-2A0A0G2JF93 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13n-2A0A0G2JF93 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13n-2A0A0G2JF93 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13n-2A0A0G2JF93 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Trav13n-2A0A0G2JF93 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Trav13n-2A0A0G2JF93 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-2A0A0G2JF93 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-2A0A0G2JF93 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-2A0A0G2JF93 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav13n-2A0A0G2JF93 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13n-2A0A0G2JF93 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13n-2A0A0G2JF93 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13n-2A0A0G2JF93 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13n-2A0A0G2JF93 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13n-2A0A0G2JF93 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13n-2A0A0G2JF93 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13n-2A0A0G2JF93 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13n-2A0A0G2JF93 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13n-2A0A0G2JF93 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav13n-2A0A0G2JF93 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13n-2A0A0G2JF93 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13n-2A0A0G2JF93 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13n-2A0A0G2JF93 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.74■□□□□ 0.27
Trav13n-2A0A0G2JF93 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-2A0A0G2JF93 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-2A0A0G2JF93 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13n-2A0A0G2JF93 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13n-2A0A0G2JF93 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav13n-2A0A0G2JF93 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav13n-2A0A0G2JF93 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13n-2A0A0G2JF93 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13n-2A0A0G2JF93 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.71■□□□□ 0.27
Trav13n-2A0A0G2JF93 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13n-2A0A0G2JF93 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-2A0A0G2JF93 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav13n-2A0A0G2JF93 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-2A0A0G2JF93 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trav13n-2A0A0G2JF93 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-2A0A0G2JF93 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-2A0A0G2JF93 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-2A0A0G2JF93 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-2A0A0G2JF93 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-2A0A0G2JF93 Amer2-203ENSMUST00000225247 2662 ntBASIC16.69■□□□□ 0.26
Trav13n-2A0A0G2JF93 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-2A0A0G2JF93 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav13n-2A0A0G2JF93 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-2A0A0G2JF93 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-2A0A0G2JF93 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13n-2A0A0G2JF93 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16.67■□□□□ 0.26
Trav13n-2A0A0G2JF93 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav13n-2A0A0G2JF93 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13n-2A0A0G2JF93 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav13n-2A0A0G2JF93 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13n-2A0A0G2JF93 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13n-2A0A0G2JF93 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13n-2A0A0G2JF93 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13n-2A0A0G2JF93 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13n-2A0A0G2JF93 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13n-2A0A0G2JF93 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-2A0A0G2JF93 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-2A0A0G2JF93 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-2A0A0G2JF93 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-2A0A0G2JF93 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-2A0A0G2JF93 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav13n-2A0A0G2JF93 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Trav13n-2A0A0G2JF93 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav13n-2A0A0G2JF93 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav13n-2A0A0G2JF93 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-2A0A0G2JF93 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-2A0A0G2JF93 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trav13n-2A0A0G2JF93 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC16.56■□□□□ 0.24
Trav13n-2A0A0G2JF93 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms