Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv8-27A0A0G2JF28 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv8-27A0A0G2JF28 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Igkv8-27A0A0G2JF28 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv8-27A0A0G2JF28 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC16.3■□□□□ 0.2
Igkv8-27A0A0G2JF28 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv8-27A0A0G2JF28 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC16.3■□□□□ 0.2
Igkv8-27A0A0G2JF28 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv8-27A0A0G2JF28 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.3■□□□□ 0.2
Igkv8-27A0A0G2JF28 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv8-27A0A0G2JF28 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv8-27A0A0G2JF28 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Igkv8-27A0A0G2JF28 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Igkv8-27A0A0G2JF28 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv8-27A0A0G2JF28 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv8-27A0A0G2JF28 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv8-27A0A0G2JF28 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv8-27A0A0G2JF28 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv8-27A0A0G2JF28 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv8-27A0A0G2JF28 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv8-27A0A0G2JF28 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv8-27A0A0G2JF28 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv8-27A0A0G2JF28 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv8-27A0A0G2JF28 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Igkv8-27A0A0G2JF28 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC16.19■□□□□ 0.18
Igkv8-27A0A0G2JF28 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv8-27A0A0G2JF28 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Igkv8-27A0A0G2JF28 Zfp131-207ENSMUST00000224946 1783 ntBASIC16.18■□□□□ 0.18
Igkv8-27A0A0G2JF28 Amer2-203ENSMUST00000225247 2662 ntBASIC16.17■□□□□ 0.18
Igkv8-27A0A0G2JF28 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv8-27A0A0G2JF28 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv8-27A0A0G2JF28 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv8-27A0A0G2JF28 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv8-27A0A0G2JF28 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv8-27A0A0G2JF28 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Igkv8-27A0A0G2JF28 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv8-27A0A0G2JF28 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv8-27A0A0G2JF28 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv8-27A0A0G2JF28 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv8-27A0A0G2JF28 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv8-27A0A0G2JF28 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Igkv8-27A0A0G2JF28 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Igkv8-27A0A0G2JF28 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Igkv8-27A0A0G2JF28 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.07■□□□□ 0.16
Igkv8-27A0A0G2JF28 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Igkv8-27A0A0G2JF28 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv8-27A0A0G2JF28 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Igkv8-27A0A0G2JF28 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv8-27A0A0G2JF28 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv8-27A0A0G2JF28 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv8-27A0A0G2JF28 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Igkv8-27A0A0G2JF28 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv8-27A0A0G2JF28 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.05■□□□□ 0.16
Igkv8-27A0A0G2JF28 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Igkv8-27A0A0G2JF28 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Igkv8-27A0A0G2JF28 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv8-27A0A0G2JF28 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv8-27A0A0G2JF28 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Igkv8-27A0A0G2JF28 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv8-27A0A0G2JF28 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv8-27A0A0G2JF28 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC16.01■□□□□ 0.15
Igkv8-27A0A0G2JF28 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv8-27A0A0G2JF28 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igkv8-27A0A0G2JF28 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv8-27A0A0G2JF28 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv8-27A0A0G2JF28 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv8-27A0A0G2JF28 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv8-27A0A0G2JF28 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv8-27A0A0G2JF28 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv8-27A0A0G2JF28 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv8-27A0A0G2JF28 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv8-27A0A0G2JF28 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv8-27A0A0G2JF28 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Igkv8-27A0A0G2JF28 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv8-27A0A0G2JF28 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Igkv8-27A0A0G2JF28 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv8-27A0A0G2JF28 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv8-27A0A0G2JF28 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv8-27A0A0G2JF28 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv8-27A0A0G2JF28 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Igkv8-27A0A0G2JF28 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC15.91■□□□□ 0.14
Igkv8-27A0A0G2JF28 AC153890.1-201ENSMUST00000220021 2469 ntBASIC15.91■□□□□ 0.14
Igkv8-27A0A0G2JF28 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Igkv8-27A0A0G2JF28 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC15.9■□□□□ 0.14
Igkv8-27A0A0G2JF28 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Igkv8-27A0A0G2JF28 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Igkv8-27A0A0G2JF28 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Igkv8-27A0A0G2JF28 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Igkv8-27A0A0G2JF28 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv8-27A0A0G2JF28 Gm27325-201ENSMUST00000175467 74 ntBASIC15.88■□□□□ 0.13
Igkv8-27A0A0G2JF28 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv8-27A0A0G2JF28 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv8-27A0A0G2JF28 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv8-27A0A0G2JF28 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv8-27A0A0G2JF28 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC15.86■□□□□ 0.13
Igkv8-27A0A0G2JF28 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv8-27A0A0G2JF28 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv8-27A0A0G2JF28 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv8-27A0A0G2JF28 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Igkv8-27A0A0G2JF28 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms