Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Tcrg-V4A0A0B4J1J8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Tcrg-V4A0A0B4J1J8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tcrg-V4A0A0B4J1J8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tcrg-V4A0A0B4J1J8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tcrg-V4A0A0B4J1J8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tcrg-V4A0A0B4J1J8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tcrg-V4A0A0B4J1J8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tcrg-V4A0A0B4J1J8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tcrg-V4A0A0B4J1J8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Tcrg-V4A0A0B4J1J8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tcrg-V4A0A0B4J1J8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tcrg-V4A0A0B4J1J8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tcrg-V4A0A0B4J1J8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tcrg-V4A0A0B4J1J8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tcrg-V4A0A0B4J1J8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tcrg-V4A0A0B4J1J8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcrg-V4A0A0B4J1J8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcrg-V4A0A0B4J1J8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tcrg-V4A0A0B4J1J8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tcrg-V4A0A0B4J1J8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcrg-V4A0A0B4J1J8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tcrg-V4A0A0B4J1J8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tcrg-V4A0A0B4J1J8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcrg-V4A0A0B4J1J8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tcrg-V4A0A0B4J1J8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcrg-V4A0A0B4J1J8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcrg-V4A0A0B4J1J8 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.25■□□□□ 0.67
Tcrg-V4A0A0B4J1J8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcrg-V4A0A0B4J1J8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tcrg-V4A0A0B4J1J8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcrg-V4A0A0B4J1J8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcrg-V4A0A0B4J1J8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.23■□□□□ 0.67
Tcrg-V4A0A0B4J1J8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcrg-V4A0A0B4J1J8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tcrg-V4A0A0B4J1J8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcrg-V4A0A0B4J1J8 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.16■□□□□ 0.66
Tcrg-V4A0A0B4J1J8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcrg-V4A0A0B4J1J8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcrg-V4A0A0B4J1J8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcrg-V4A0A0B4J1J8 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.16■□□□□ 0.66
Tcrg-V4A0A0B4J1J8 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.15■□□□□ 0.66
Tcrg-V4A0A0B4J1J8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcrg-V4A0A0B4J1J8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tcrg-V4A0A0B4J1J8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.14■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.13■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Tcrg-V4A0A0B4J1J8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tcrg-V4A0A0B4J1J8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Tcrg-V4A0A0B4J1J8 Gm24109-201ENSMUST00000175489 103 ntBASIC19.07■□□□□ 0.64
Tcrg-V4A0A0B4J1J8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tcrg-V4A0A0B4J1J8 Amer2-203ENSMUST00000225247 2662 ntBASIC19.06■□□□□ 0.64
Tcrg-V4A0A0B4J1J8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tcrg-V4A0A0B4J1J8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tcrg-V4A0A0B4J1J8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tcrg-V4A0A0B4J1J8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tcrg-V4A0A0B4J1J8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.96■□□□□ 0.63
Tcrg-V4A0A0B4J1J8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 Gm23366-201ENSMUST00000175022 89 ntBASIC18.95■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tcrg-V4A0A0B4J1J8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms