Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pknox1O70477 Gm44980-201ENSMUST00000205826 314 ntBASIC10.71□□□□□ -0.69
Pknox1O70477 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pknox1O70477 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.71□□□□□ -0.69
Pknox1O70477 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pknox1O70477 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pknox1O70477 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Pknox1O70477 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Pknox1O70477 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Pknox1O70477 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Pknox1O70477 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Pknox1O70477 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Pknox1O70477 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Pknox1O70477 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Pknox1O70477 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pknox1O70477 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pknox1O70477 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pknox1O70477 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Pknox1O70477 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pknox1O70477 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Pknox1O70477 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Pknox1O70477 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Gm10417-201ENSMUST00000194341 3522 ntBASIC10.7□□□□□ -0.7
Pknox1O70477 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Pknox1O70477 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Pknox1O70477 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.7□□□□□ -0.7
Pknox1O70477 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pknox1O70477 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Pknox1O70477 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Gm12663-201ENSMUST00000118481 958 ntBASIC10.7□□□□□ -0.7
Pknox1O70477 Gm13408-201ENSMUST00000119822 798 ntBASIC10.7□□□□□ -0.7
Pknox1O70477 Gm12566-201ENSMUST00000121479 359 ntBASIC10.7□□□□□ -0.7
Pknox1O70477 Gm13935-201ENSMUST00000121859 798 ntBASIC10.7□□□□□ -0.7
Pknox1O70477 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.7□□□□□ -0.7
Pknox1O70477 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC10.7□□□□□ -0.7
Pknox1O70477 Gm43378-201ENSMUST00000199336 582 ntBASIC10.7□□□□□ -0.7
Pknox1O70477 Gm9132-201ENSMUST00000210182 832 ntBASIC10.7□□□□□ -0.7
Pknox1O70477 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.7□□□□□ -0.7
Pknox1O70477 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.7□□□□□ -0.7
Pknox1O70477 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.7□□□□□ -0.7
Pknox1O70477 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.7□□□□□ -0.7
Pknox1O70477 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.7□□□□□ -0.7
Pknox1O70477 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.7□□□□□ -0.7
Pknox1O70477 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pknox1O70477 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pknox1O70477 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.69□□□□□ -0.7
Pknox1O70477 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pknox1O70477 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.69□□□□□ -0.7
Pknox1O70477 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pknox1O70477 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pknox1O70477 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pknox1O70477 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.69□□□□□ -0.7
Pknox1O70477 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pknox1O70477 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pknox1O70477 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pknox1O70477 Mir1893-201ENSMUST00000122565 83 ntBASIC10.69□□□□□ -0.7
Pknox1O70477 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.69□□□□□ -0.7
Pknox1O70477 Gm6485-201ENSMUST00000160676 439 ntBASIC10.69□□□□□ -0.7
Pknox1O70477 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pknox1O70477 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.69□□□□□ -0.7
Pknox1O70477 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pknox1O70477 Gm4812-201ENSMUST00000182847 993 ntBASIC10.69□□□□□ -0.7
Pknox1O70477 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.69□□□□□ -0.7
Pknox1O70477 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.69□□□□□ -0.7
Pknox1O70477 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pknox1O70477 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.69□□□□□ -0.7
Pknox1O70477 Id2-203ENSMUST00000222667 958 ntBASIC10.69□□□□□ -0.7
Pknox1O70477 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.69□□□□□ -0.7
Pknox1O70477 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.69□□□□□ -0.7
Pknox1O70477 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pknox1O70477 Gm44888-201ENSMUST00000209119 2541 ntBASIC10.69□□□□□ -0.7
Pknox1O70477 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pknox1O70477 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.69□□□□□ -0.7
Pknox1O70477 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Pknox1O70477 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pknox1O70477 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms