Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx54Q8K4L0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 H2-Pb-201ENSMUST00000172731 531 ntBASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Ighv1-8-201ENSMUST00000192236 293 ntBASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Gm43002-201ENSMUST00000200310 155 ntBASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Saa-ps-201ENSMUST00000211148 320 ntBASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Gm18504-201ENSMUST00000220917 929 ntBASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 AC161877.1-201ENSMUST00000227736 699 ntBASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.14□□□□□ -0.15
Ddx54Q8K4L0 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Gm25561-201ENSMUST00000104607 125 ntBASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Gm13071-201ENSMUST00000122237 376 ntBASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Gm23916-201ENSMUST00000158484 399 ntBASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Gm5851-201ENSMUST00000194132 1204 ntBASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Gm7047-201ENSMUST00000196224 1063 ntBASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Gm42617-201ENSMUST00000197640 1229 ntBASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Gm18749-201ENSMUST00000222410 692 ntBASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx54Q8K4L0 Gm11231-201ENSMUST00000117895 1706 ntBASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Gm38312-201ENSMUST00000195426 1746 ntBASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx54Q8K4L0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms