Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Col8a2P25318 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Col8a2P25318 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Col8a2P25318 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Col8a2P25318 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Col8a2P25318 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Col8a2P25318 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Col8a2P25318 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Col8a2P25318 Gm44740-201ENSMUST00000205603 1614 ntBASIC9.02□□□□□ -0.96
Col8a2P25318 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Col8a2P25318 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC9.02□□□□□ -0.97
Col8a2P25318 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Col8a2P25318 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.02□□□□□ -0.97
Col8a2P25318 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.02□□□□□ -0.97
Col8a2P25318 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.02□□□□□ -0.97
Col8a2P25318 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.02□□□□□ -0.97
Col8a2P25318 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Col8a2P25318 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC9.02□□□□□ -0.97
Col8a2P25318 Gm5764-201ENSMUST00000118817 885 ntBASIC9.02□□□□□ -0.97
Col8a2P25318 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Col8a2P25318 Gm15196-201ENSMUST00000121406 482 ntBASIC9.02□□□□□ -0.97
Col8a2P25318 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.02□□□□□ -0.97
Col8a2P25318 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Gm28671-201ENSMUST00000187036 692 ntBASIC9.02□□□□□ -0.97
Col8a2P25318 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC9.02□□□□□ -0.97
Col8a2P25318 Gm37452-201ENSMUST00000194416 1160 ntBASIC9.02□□□□□ -0.97
Col8a2P25318 Gm43969-201ENSMUST00000204833 535 ntBASIC9.02□□□□□ -0.97
Col8a2P25318 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Col8a2P25318 AC168279.1-201ENSMUST00000214611 382 ntBASIC9.02□□□□□ -0.97
Col8a2P25318 AC162932.1-201ENSMUST00000219209 872 ntBASIC9.02□□□□□ -0.97
Col8a2P25318 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC9.02□□□□□ -0.97
Col8a2P25318 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Col8a2P25318 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Col8a2P25318 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Col8a2P25318 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC9.02□□□□□ -0.97
Col8a2P25318 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.02□□□□□ -0.97
Col8a2P25318 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.02□□□□□ -0.97
Col8a2P25318 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Col8a2P25318 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.02□□□□□ -0.97
Col8a2P25318 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col8a2P25318 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Col8a2P25318 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Col8a2P25318 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Gm5257-201ENSMUST00000121823 790 ntBASIC9.01□□□□□ -0.97
Col8a2P25318 Gm11993-201ENSMUST00000121861 820 ntBASIC9.01□□□□□ -0.97
Col8a2P25318 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC9.01□□□□□ -0.97
Col8a2P25318 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC9.01□□□□□ -0.97
Col8a2P25318 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC9.01□□□□□ -0.97
Col8a2P25318 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Col8a2P25318 Gm16547-201ENSMUST00000159474 293 ntBASIC9.01□□□□□ -0.97
Col8a2P25318 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC9.01□□□□□ -0.97
Col8a2P25318 Ighv2-1-201ENSMUST00000170946 353 ntBASIC9.01□□□□□ -0.97
Col8a2P25318 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Gm25677-201ENSMUST00000174983 72 ntBASIC9.01□□□□□ -0.97
Col8a2P25318 Gm28746-201ENSMUST00000187453 380 ntBASIC9.01□□□□□ -0.97
Col8a2P25318 Gm5267-201ENSMUST00000191574 1045 ntBASIC9.01□□□□□ -0.97
Col8a2P25318 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC9.01□□□□□ -0.97
Col8a2P25318 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC9.01□□□□□ -0.97
Col8a2P25318 Gm18204-201ENSMUST00000209835 793 ntBASIC9.01□□□□□ -0.97
Col8a2P25318 Gm18042-201ENSMUST00000219887 790 ntBASIC9.01□□□□□ -0.97
Col8a2P25318 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Col8a2P25318 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col8a2P25318 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms