Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rnf149Q3U2C5 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rnf149Q3U2C5 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Gm15573-201ENSMUST00000119487 540 ntBASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Gm11956-201ENSMUST00000119525 512 ntBASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Gm4726-201ENSMUST00000135604 736 ntBASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Gm6019-201ENSMUST00000148369 736 ntBASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Gm12407-201ENSMUST00000180219 324 ntBASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Gm44506-201ENSMUST00000206278 965 ntBASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Gm25125-201ENSMUST00000083340 136 ntBASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf149Q3U2C5 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf149Q3U2C5 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.71□□□□□ -0.85
Rnf149Q3U2C5 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf149Q3U2C5 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Rnf149Q3U2C5 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf149Q3U2C5 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf149Q3U2C5 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Rnf149Q3U2C5 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf149Q3U2C5 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.71□□□□□ -0.85
Rnf149Q3U2C5 Gm22920-201ENSMUST00000102175 109 ntBASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 Gm9220-201ENSMUST00000190721 2544 ntBASIC9.71□□□□□ -0.86
Rnf149Q3U2C5 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Rnf149Q3U2C5 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf149Q3U2C5 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.7□□□□□ -0.86
Rnf149Q3U2C5 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf149Q3U2C5 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf149Q3U2C5 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf149Q3U2C5 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf149Q3U2C5 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf149Q3U2C5 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf149Q3U2C5 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms