Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 AC154433.1-201ENSMUST00000224401 1183 ntBASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Gm5510-201ENSMUST00000117826 486 ntBASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Gm27826-201ENSMUST00000175282 255 ntBASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 AC102523.1-201ENSMUST00000228706 1144 ntBASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Gm9519-201ENSMUST00000206108 1337 ntBASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Nkx6-1Q99MA9 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms