Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm26443-201ENSMUST00000179610 110 ntBASIC11.38□□□□□ -0.59
Hoxd8P23463 Gm7928-201ENSMUST00000181249 701 ntBASIC11.38□□□□□ -0.59
Hoxd8P23463 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Hoxd8P23463 Gm28064-201ENSMUST00000185639 858 ntBASIC11.38□□□□□ -0.59
Hoxd8P23463 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.38□□□□□ -0.59
Hoxd8P23463 Gm28438-201ENSMUST00000188299 345 ntBASIC11.38□□□□□ -0.59
Hoxd8P23463 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Gm20177-201ENSMUST00000203705 334 ntBASIC11.38□□□□□ -0.59
Hoxd8P23463 AC154806.7-201ENSMUST00000227998 202 ntBASIC11.38□□□□□ -0.59
Hoxd8P23463 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.38□□□□□ -0.59
Hoxd8P23463 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Hoxd8P23463 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxd8P23463 Gm37863-201ENSMUST00000194911 1457 ntBASIC11.38□□□□□ -0.59
Hoxd8P23463 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hoxd8P23463 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxd8P23463 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hoxd8P23463 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hoxd8P23463 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Hoxd8P23463 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Hoxd8P23463 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.37□□□□□ -0.59
Hoxd8P23463 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hoxd8P23463 Gm13059-201ENSMUST00000119881 398 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 Gm5395-201ENSMUST00000121650 915 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 Gm16112-201ENSMUST00000159075 382 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 Gm5277-201ENSMUST00000164923 556 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 Gm4775-201ENSMUST00000169588 402 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.37□□□□□ -0.59
Hoxd8P23463 Gm5808-201ENSMUST00000178090 357 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 Gm8824-201ENSMUST00000182962 990 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hoxd8P23463 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC11.37□□□□□ -0.59
Hoxd8P23463 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 Gm18123-201ENSMUST00000210874 822 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 AC132384.6-201ENSMUST00000218976 1206 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 AC155300.1-201ENSMUST00000219134 480 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 CT009711.2-202ENSMUST00000224538 973 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 AC164883.7-201ENSMUST00000228534 851 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hoxd8P23463 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Gm6564-201ENSMUST00000075377 619 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 Atf7-201ENSMUST00000096143 390 ntBASIC11.37□□□□□ -0.59
Hoxd8P23463 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.37□□□□□ -0.59
Hoxd8P23463 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hoxd8P23463 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxd8P23463 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxd8P23463 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC11.36□□□□□ -0.59
Hoxd8P23463 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Hoxd8P23463 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxd8P23463 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxd8P23463 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxd8P23463 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxd8P23463 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hoxd8P23463 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Hoxd8P23463 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxd8P23463 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxd8P23463 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxd8P23463 Gm22495-201ENSMUST00000104492 126 ntBASIC11.36□□□□□ -0.59
Hoxd8P23463 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.36□□□□□ -0.59
Hoxd8P23463 Gm12961-201ENSMUST00000120507 1050 ntBASIC11.36□□□□□ -0.59
Hoxd8P23463 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms