Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.56□□□□□ -0.08
CD48P09326 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 AL596276.2-201ENST00000447525 331 ntBASIC14.56□□□□□ -0.08
CD48P09326 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.56□□□□□ -0.08
CD48P09326 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.56□□□□□ -0.08
CD48P09326 AC092658.1-201ENST00000505836 891 ntBASIC14.56□□□□□ -0.08
CD48P09326 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CD48P09326 AC079336.7-201ENST00000623428 1078 ntBASIC14.56□□□□□ -0.08
CD48P09326 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.56□□□□□ -0.08
CD48P09326 FRMPD2B-201ENST00000431305 1347 ntBASIC14.56□□□□□ -0.08
CD48P09326 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.56□□□□□ -0.08
CD48P09326 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.56□□□□□ -0.08
CD48P09326 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.56□□□□□ -0.08
CD48P09326 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.56□□□□□ -0.08
CD48P09326 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD48P09326 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.55□□□□□ -0.08
CD48P09326 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CD48P09326 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.55□□□□□ -0.08
CD48P09326 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CD48P09326 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CD48P09326 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.55□□□□□ -0.08
CD48P09326 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.55□□□□□ -0.08
CD48P09326 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.55□□□□□ -0.08
CD48P09326 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.55□□□□□ -0.08
CD48P09326 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.55□□□□□ -0.08
CD48P09326 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.55□□□□□ -0.08
CD48P09326 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.55□□□□□ -0.08
CD48P09326 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.55□□□□□ -0.08
CD48P09326 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.55□□□□□ -0.08
CD48P09326 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.55□□□□□ -0.08
CD48P09326 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
CD48P09326 AL161773.1-201ENST00000624845 863 ntBASIC14.55□□□□□ -0.08
CD48P09326 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.55□□□□□ -0.08
CD48P09326 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.55□□□□□ -0.08
CD48P09326 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.55□□□□□ -0.08
CD48P09326 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CD48P09326 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.55□□□□□ -0.08
CD48P09326 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CD48P09326 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.55□□□□□ -0.08
CD48P09326 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD48P09326 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.55□□□□□ -0.08
CD48P09326 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.54□□□□□ -0.08
CD48P09326 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.54□□□□□ -0.08
CD48P09326 NUTM2HP-201ENST00000442076 2498 ntBASIC14.54□□□□□ -0.08
CD48P09326 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CD48P09326 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms