Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Tpm1P58771 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Tpm1P58771 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Tpm1P58771 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC12.13□□□□□ -0.47
Tpm1P58771 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tpm1P58771 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Gm7357-201ENSMUST00000195361 2991 ntBASIC12.12□□□□□ -0.47
Tpm1P58771 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tpm1P58771 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Tpm1P58771 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.12□□□□□ -0.47
Tpm1P58771 Gm13461-201ENSMUST00000120980 662 ntBASIC12.12□□□□□ -0.47
Tpm1P58771 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.12□□□□□ -0.47
Tpm1P58771 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Tpm1P58771 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.12□□□□□ -0.47
Tpm1P58771 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.12□□□□□ -0.47
Tpm1P58771 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Tpm1P58771 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.12□□□□□ -0.47
Tpm1P58771 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tpm1P58771 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.12□□□□□ -0.47
Tpm1P58771 Gm12407-201ENSMUST00000180219 324 ntBASIC12.12□□□□□ -0.47
Tpm1P58771 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.12□□□□□ -0.47
Tpm1P58771 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.12□□□□□ -0.47
Tpm1P58771 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.12□□□□□ -0.47
Tpm1P58771 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.12□□□□□ -0.47
Tpm1P58771 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.12□□□□□ -0.47
Tpm1P58771 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Tpm1P58771 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tpm1P58771 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC12.12□□□□□ -0.47
Tpm1P58771 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC12.12□□□□□ -0.47
Tpm1P58771 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tpm1P58771 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tpm1P58771 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tpm1P58771 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Tpm1P58771 AC144938.1-201ENSMUST00000223994 2167 ntBASIC12.11□□□□□ -0.47
Tpm1P58771 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Tpm1P58771 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Tpm1P58771 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.11□□□□□ -0.47
Tpm1P58771 Gm25148-201ENSMUST00000104611 123 ntBASIC12.11□□□□□ -0.47
Tpm1P58771 Gm8111-201ENSMUST00000117659 987 ntBASIC12.11□□□□□ -0.47
Tpm1P58771 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.11□□□□□ -0.47
Tpm1P58771 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Tpm1P58771 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.11□□□□□ -0.47
Tpm1P58771 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.11□□□□□ -0.47
Tpm1P58771 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.11□□□□□ -0.47
Tpm1P58771 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms