Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Rph3aP47708 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.62□□□□□ -0.71
Rph3aP47708 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Rph3aP47708 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.62□□□□□ -0.71
Rph3aP47708 Gm14263-201ENSMUST00000117955 746 ntBASIC10.62□□□□□ -0.71
Rph3aP47708 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.62□□□□□ -0.71
Rph3aP47708 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.62□□□□□ -0.71
Rph3aP47708 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.62□□□□□ -0.71
Rph3aP47708 Gm43163-201ENSMUST00000196571 442 ntBASIC10.62□□□□□ -0.71
Rph3aP47708 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.62□□□□□ -0.71
Rph3aP47708 Gm5302-201ENSMUST00000202130 796 ntBASIC10.62□□□□□ -0.71
Rph3aP47708 Gm2875-201ENSMUST00000211333 360 ntBASIC10.62□□□□□ -0.71
Rph3aP47708 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.62□□□□□ -0.71
Rph3aP47708 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.62□□□□□ -0.71
Rph3aP47708 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.62□□□□□ -0.71
Rph3aP47708 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.62□□□□□ -0.71
Rph3aP47708 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Rph3aP47708 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Rph3aP47708 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Rph3aP47708 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Rph3aP47708 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rph3aP47708 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.61□□□□□ -0.71
Rph3aP47708 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rph3aP47708 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rph3aP47708 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Rph3aP47708 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.61□□□□□ -0.71
Rph3aP47708 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rph3aP47708 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Gm25766-201ENSMUST00000104101 131 ntBASIC10.61□□□□□ -0.71
Rph3aP47708 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.61□□□□□ -0.71
Rph3aP47708 Gm14460-201ENSMUST00000121511 639 ntBASIC10.61□□□□□ -0.71
Rph3aP47708 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.61□□□□□ -0.71
Rph3aP47708 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.61□□□□□ -0.71
Rph3aP47708 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.61□□□□□ -0.71
Rph3aP47708 Mir7076-201ENSMUST00000183519 74 ntBASIC10.61□□□□□ -0.71
Rph3aP47708 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.61□□□□□ -0.71
Rph3aP47708 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Gm8197-202ENSMUST00000193422 934 ntBASIC10.61□□□□□ -0.71
Rph3aP47708 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.61□□□□□ -0.71
Rph3aP47708 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.61□□□□□ -0.71
Rph3aP47708 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.61□□□□□ -0.71
Rph3aP47708 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.61□□□□□ -0.71
Rph3aP47708 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.61□□□□□ -0.71
Rph3aP47708 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Sp3-201ENSMUST00000066003 3808 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rph3aP47708 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 AC131029.1-201ENSMUST00000226391 2929 ntBASIC10.61□□□□□ -0.71
Rph3aP47708 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Rph3aP47708 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rph3aP47708 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.61□□□□□ -0.71
Rph3aP47708 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rph3aP47708 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rph3aP47708 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.6□□□□□ -0.71
Rph3aP47708 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rph3aP47708 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Rph3aP47708 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.6□□□□□ -0.71
Rph3aP47708 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rph3aP47708 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rph3aP47708 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rph3aP47708 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rph3aP47708 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rph3aP47708 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rph3aP47708 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rph3aP47708 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rph3aP47708 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rph3aP47708 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rph3aP47708 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms