Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Ddx54Q8K4L0 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 AC124561.1-202ENSMUST00000228652 1929 ntBASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Gm16439-201ENSMUST00000100687 564 ntBASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Gm12774-201ENSMUST00000117881 416 ntBASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Gm5766-202ENSMUST00000161633 799 ntBASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Gm38135-201ENSMUST00000195068 502 ntBASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Gm4866-201ENSMUST00000197408 589 ntBASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 AC141884.2-201ENSMUST00000228811 775 ntBASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Gm7790-201ENSMUST00000118716 1310 ntBASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Gm38220-201ENSMUST00000195774 1447 ntBASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx54Q8K4L0 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Gm8754-201ENSMUST00000118391 520 ntBASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Gm26021-201ENSMUST00000158664 131 ntBASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Gm24346-201ENSMUST00000158712 194 ntBASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Gm18299-201ENSMUST00000192026 636 ntBASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Gm7812-201ENSMUST00000203479 874 ntBASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Gm44044-201ENSMUST00000205178 1089 ntBASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Gm44663-201ENSMUST00000206898 3150 ntBASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Btrc-209ENSMUST00000224478 2194 ntBASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 AC129017.2-201ENSMUST00000226118 1284 ntBASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx54Q8K4L0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Ddx54Q8K4L0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx54Q8K4L0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx54Q8K4L0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ddx54Q8K4L0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx54Q8K4L0 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx54Q8K4L0 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms