Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Gm10051-201ENSMUST00000145209 414 ntBASIC10.65□□□□□ -0.7
Cdh17Q9R100 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.65□□□□□ -0.7
Cdh17Q9R100 Mir6546-201ENSMUST00000184460 62 ntBASIC10.65□□□□□ -0.7
Cdh17Q9R100 Gm3551-201ENSMUST00000190750 664 ntBASIC10.65□□□□□ -0.7
Cdh17Q9R100 Gm19091-201ENSMUST00000208120 978 ntBASIC10.65□□□□□ -0.7
Cdh17Q9R100 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.65□□□□□ -0.71
Cdh17Q9R100 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cdh17Q9R100 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cdh17Q9R100 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cdh17Q9R100 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cdh17Q9R100 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cdh17Q9R100 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cdh17Q9R100 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.64□□□□□ -0.71
Cdh17Q9R100 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.64□□□□□ -0.71
Cdh17Q9R100 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.64□□□□□ -0.71
Cdh17Q9R100 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.64□□□□□ -0.71
Cdh17Q9R100 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Gm9062-201ENSMUST00000117712 727 ntBASIC10.64□□□□□ -0.71
Cdh17Q9R100 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.64□□□□□ -0.71
Cdh17Q9R100 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.64□□□□□ -0.71
Cdh17Q9R100 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdh17Q9R100 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh17Q9R100 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh17Q9R100 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.63□□□□□ -0.71
Cdh17Q9R100 Gm12337-201ENSMUST00000119634 400 ntBASIC10.63□□□□□ -0.71
Cdh17Q9R100 Gm14942-201ENSMUST00000119642 336 ntBASIC10.63□□□□□ -0.71
Cdh17Q9R100 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.63□□□□□ -0.71
Cdh17Q9R100 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.63□□□□□ -0.71
Cdh17Q9R100 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.63□□□□□ -0.71
Cdh17Q9R100 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms