Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.42□□□□□ -0.42
SFTPBP07988 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.42□□□□□ -0.42
SFTPBP07988 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.42□□□□□ -0.42
SFTPBP07988 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SFTPBP07988 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SFTPBP07988 AC015818.8-201ENST00000587907 1519 ntBASIC12.42□□□□□ -0.42
SFTPBP07988 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SFTPBP07988 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SFTPBP07988 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SFTPBP07988 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SFTPBP07988 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SFTPBP07988 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.41□□□□□ -0.42
SFTPBP07988 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.41□□□□□ -0.42
SFTPBP07988 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.41□□□□□ -0.42
SFTPBP07988 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SFTPBP07988 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
SFTPBP07988 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SFTPBP07988 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SFTPBP07988 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SFTPBP07988 BRWD1P1-201ENST00000401091 371 ntBASIC12.41□□□□□ -0.42
SFTPBP07988 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.41□□□□□ -0.42
SFTPBP07988 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.41□□□□□ -0.42
SFTPBP07988 AL355994.2-201ENST00000447882 704 ntBASIC12.41□□□□□ -0.42
SFTPBP07988 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SFTPBP07988 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.41□□□□□ -0.42
SFTPBP07988 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.41□□□□□ -0.42
SFTPBP07988 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.41□□□□□ -0.42
SFTPBP07988 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SFTPBP07988 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.41□□□□□ -0.42
SFTPBP07988 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.41□□□□□ -0.42
SFTPBP07988 AC023794.5-201ENST00000564380 2157 ntBASIC12.41□□□□□ -0.42
SFTPBP07988 MIR4741-201ENST00000579822 90 ntBASIC12.41□□□□□ -0.42
SFTPBP07988 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SFTPBP07988 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.41□□□□□ -0.42
SFTPBP07988 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SFTPBP07988 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.41□□□□□ -0.42
SFTPBP07988 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SFTPBP07988 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SFTPBP07988 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SFTPBP07988 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SFTPBP07988 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SFTPBP07988 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.41□□□□□ -0.42
SFTPBP07988 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SFTPBP07988 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SFTPBP07988 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SFTPBP07988 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.4□□□□□ -0.42
SFTPBP07988 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 AC064801.2-201ENST00000625052 1303 ntBASIC12.4□□□□□ -0.42
SFTPBP07988 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.4□□□□□ -0.42
SFTPBP07988 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.4□□□□□ -0.42
SFTPBP07988 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.4□□□□□ -0.42
SFTPBP07988 AC015909.5-201ENST00000624336 2266 ntBASIC12.4□□□□□ -0.42
SFTPBP07988 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SFTPBP07988 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.4□□□□□ -0.42
SFTPBP07988 AC090114.2-201ENST00000608477 7054 ntBASIC12.4□□□□□ -0.42
SFTPBP07988 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.4□□□□□ -0.42
SFTPBP07988 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.4□□□□□ -0.42
SFTPBP07988 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.4□□□□□ -0.42
SFTPBP07988 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
SFTPBP07988 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
SFTPBP07988 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SFTPBP07988 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.4□□□□□ -0.42
SFTPBP07988 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 MIR1908-201ENST00000410394 80 ntBASIC12.4□□□□□ -0.42
SFTPBP07988 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.4□□□□□ -0.42
SFTPBP07988 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.4□□□□□ -0.42
SFTPBP07988 RPL13AP20-201ENST00000459725 609 ntBASIC12.4□□□□□ -0.42
SFTPBP07988 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.4□□□□□ -0.42
SFTPBP07988 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.4□□□□□ -0.42
SFTPBP07988 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SFTPBP07988 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.4□□□□□ -0.42
SFTPBP07988 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SFTPBP07988 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
SFTPBP07988 AC027237.1-201ENST00000560942 655 ntBASIC12.4□□□□□ -0.42
SFTPBP07988 MIR4538-201ENST00000581377 78 ntBASIC12.4□□□□□ -0.42
SFTPBP07988 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.4□□□□□ -0.42
SFTPBP07988 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.4□□□□□ -0.42
SFTPBP07988 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.4□□□□□ -0.42
SFTPBP07988 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SFTPBP07988 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
SFTPBP07988 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms