Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
P04224 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Mir8093-201ENSMUST00000185043 137 ntBASIC9.6□□□□□ -0.87
P04224 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.6□□□□□ -0.87
P04224 Gm5982-201ENSMUST00000196234 512 ntBASIC9.6□□□□□ -0.87
P04224 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.6□□□□□ -0.87
P04224 Gm26047-202ENSMUST00000198840 115 ntBASIC9.6□□□□□ -0.87
P04224 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC9.6□□□□□ -0.87
P04224 Gm4157-201ENSMUST00000211647 679 ntBASIC9.6□□□□□ -0.87
P04224 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC9.6□□□□□ -0.87
P04224 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Dab2-202ENSMUST00000080880 4663 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
P04224 Gm44103-201ENSMUST00000204364 3662 ntBASIC9.6□□□□□ -0.87
P04224 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
P04224 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
P04224 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
P04224 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC9.6□□□□□ -0.87
P04224 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
P04224 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.6□□□□□ -0.87
P04224 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Rps6kc1-201ENSMUST00000061611 3995 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
P04224 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
P04224 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.59□□□□□ -0.87
P04224 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
P04224 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.59□□□□□ -0.87
P04224 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC9.59□□□□□ -0.87
P04224 Gm43184-201ENSMUST00000197247 542 ntBASIC9.59□□□□□ -0.87
P04224 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.59□□□□□ -0.87
P04224 Gm7940-201ENSMUST00000218195 769 ntBASIC9.59□□□□□ -0.87
P04224 AC122371.3-201ENSMUST00000223402 1061 ntBASIC9.59□□□□□ -0.87
P04224 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.59□□□□□ -0.87
P04224 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.59□□□□□ -0.87
P04224 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
P04224 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
P04224 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.59□□□□□ -0.87
P04224 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC9.59□□□□□ -0.87
P04224 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC9.59□□□□□ -0.87
P04224 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04224 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.59□□□□□ -0.87
P04224 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC9.59□□□□□ -0.87
P04224 Gm38001-201ENSMUST00000192900 3761 ntBASIC9.59□□□□□ -0.87
P04224 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
P04224 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
P04224 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC9.58□□□□□ -0.88
P04224 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
P04224 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.58□□□□□ -0.88
P04224 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.58□□□□□ -0.88
P04224 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
P04224 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.58□□□□□ -0.88
P04224 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms