Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upk1aQ9D132 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.13■□□□□ 0.65
Upk1aQ9D132 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.13■□□□□ 0.65
Upk1aQ9D132 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upk1aQ9D132 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Upk1aQ9D132 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upk1aQ9D132 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upk1aQ9D132 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk1aQ9D132 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk1aQ9D132 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk1aQ9D132 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.12■□□□□ 0.65
Upk1aQ9D132 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.12■□□□□ 0.65
Upk1aQ9D132 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.12■□□□□ 0.65
Upk1aQ9D132 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk1aQ9D132 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk1aQ9D132 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk1aQ9D132 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Upk1aQ9D132 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1aQ9D132 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1aQ9D132 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk1aQ9D132 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk1aQ9D132 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk1aQ9D132 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.1■□□□□ 0.65
Upk1aQ9D132 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Upk1aQ9D132 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.1■□□□□ 0.65
Upk1aQ9D132 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk1aQ9D132 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Upk1aQ9D132 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Upk1aQ9D132 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Upk1aQ9D132 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.09■□□□□ 0.65
Upk1aQ9D132 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Upk1aQ9D132 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Upk1aQ9D132 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Upk1aQ9D132 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Upk1aQ9D132 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Upk1aQ9D132 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Upk1aQ9D132 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Upk1aQ9D132 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Upk1aQ9D132 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Upk1aQ9D132 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Upk1aQ9D132 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Upk1aQ9D132 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Upk1aQ9D132 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Upk1aQ9D132 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upk1aQ9D132 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upk1aQ9D132 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Upk1aQ9D132 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upk1aQ9D132 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upk1aQ9D132 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upk1aQ9D132 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upk1aQ9D132 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Upk1aQ9D132 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Upk1aQ9D132 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Upk1aQ9D132 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.07■□□□□ 0.64
Upk1aQ9D132 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Upk1aQ9D132 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Upk1aQ9D132 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Upk1aQ9D132 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.06■□□□□ 0.64
Upk1aQ9D132 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upk1aQ9D132 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upk1aQ9D132 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Upk1aQ9D132 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.06■□□□□ 0.64
Upk1aQ9D132 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upk1aQ9D132 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upk1aQ9D132 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Upk1aQ9D132 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Upk1aQ9D132 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upk1aQ9D132 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Upk1aQ9D132 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upk1aQ9D132 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Upk1aQ9D132 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upk1aQ9D132 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upk1aQ9D132 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upk1aQ9D132 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upk1aQ9D132 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Upk1aQ9D132 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upk1aQ9D132 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upk1aQ9D132 Cap2-205ENSMUST00000225824 1634 ntBASIC19.04■□□□□ 0.64
Upk1aQ9D132 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upk1aQ9D132 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Upk1aQ9D132 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Upk1aQ9D132 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upk1aQ9D132 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upk1aQ9D132 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Upk1aQ9D132 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upk1aQ9D132 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms