Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.23■■□□□ 1.31
Rtp1Q8C8C1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rtp1Q8C8C1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rtp1Q8C8C1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Rtp1Q8C8C1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rtp1Q8C8C1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rtp1Q8C8C1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rtp1Q8C8C1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Rtp1Q8C8C1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rtp1Q8C8C1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rtp1Q8C8C1 Gm12441-201ENSMUST00000121806 588 ntBASIC23.22■■□□□ 1.31
Rtp1Q8C8C1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rtp1Q8C8C1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC23.22■■□□□ 1.31
Rtp1Q8C8C1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.22■■□□□ 1.31
Rtp1Q8C8C1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rtp1Q8C8C1 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.21■■□□□ 1.31
Rtp1Q8C8C1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtp1Q8C8C1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtp1Q8C8C1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtp1Q8C8C1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtp1Q8C8C1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtp1Q8C8C1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtp1Q8C8C1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Rtp1Q8C8C1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rtp1Q8C8C1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtp1Q8C8C1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtp1Q8C8C1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Rtp1Q8C8C1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtp1Q8C8C1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rtp1Q8C8C1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Rtp1Q8C8C1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC23.19■■□□□ 1.3
Rtp1Q8C8C1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rtp1Q8C8C1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Rtp1Q8C8C1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rtp1Q8C8C1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.19■■□□□ 1.3
Rtp1Q8C8C1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rtp1Q8C8C1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rtp1Q8C8C1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rtp1Q8C8C1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.19■■□□□ 1.3
Rtp1Q8C8C1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rtp1Q8C8C1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp1Q8C8C1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp1Q8C8C1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp1Q8C8C1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Rtp1Q8C8C1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC23.18■■□□□ 1.3
Rtp1Q8C8C1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp1Q8C8C1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp1Q8C8C1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp1Q8C8C1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp1Q8C8C1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp1Q8C8C1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp1Q8C8C1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rtp1Q8C8C1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Rtp1Q8C8C1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC23.17■■□□□ 1.3
Rtp1Q8C8C1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.17■■□□□ 1.3
Rtp1Q8C8C1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC23.17■■□□□ 1.3
Rtp1Q8C8C1 Gm10252-201ENSMUST00000209541 832 ntBASIC23.17■■□□□ 1.3
Rtp1Q8C8C1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC23.17■■□□□ 1.3
Rtp1Q8C8C1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rtp1Q8C8C1 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.17■■□□□ 1.3
Rtp1Q8C8C1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rtp1Q8C8C1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Rtp1Q8C8C1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Rtp1Q8C8C1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtp1Q8C8C1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rtp1Q8C8C1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rtp1Q8C8C1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC23.16■■□□□ 1.3
Rtp1Q8C8C1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtp1Q8C8C1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtp1Q8C8C1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rtp1Q8C8C1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtp1Q8C8C1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rtp1Q8C8C1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtp1Q8C8C1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtp1Q8C8C1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
Rtp1Q8C8C1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Rtp1Q8C8C1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rtp1Q8C8C1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC23.14■■□□□ 1.29
Rtp1Q8C8C1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Rtp1Q8C8C1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Rtp1Q8C8C1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtp1Q8C8C1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtp1Q8C8C1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtp1Q8C8C1 Gm13234-201ENSMUST00000120010 747 ntBASIC23.13■■□□□ 1.29
Rtp1Q8C8C1 Gm22325-201ENSMUST00000158904 308 ntBASIC23.13■■□□□ 1.29
Rtp1Q8C8C1 Gm22240-201ENSMUST00000175225 82 ntBASIC23.13■■□□□ 1.29
Rtp1Q8C8C1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.13■■□□□ 1.29
Rtp1Q8C8C1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.13■■□□□ 1.29
Rtp1Q8C8C1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.12■■□□□ 1.29
Rtp1Q8C8C1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Rtp1Q8C8C1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtp1Q8C8C1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rtp1Q8C8C1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtp1Q8C8C1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtp1Q8C8C1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rtp1Q8C8C1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.11■■□□□ 1.29
Rtp1Q8C8C1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtp1Q8C8C1 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.11■■□□□ 1.29
Rtp1Q8C8C1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
Rtp1Q8C8C1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms