Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ppp1r3eQ8BRJ4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.87■□□□□ 0.61
Ppp1r3eQ8BRJ4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.87■□□□□ 0.61
Ppp1r3eQ8BRJ4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ppp1r3eQ8BRJ4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.87■□□□□ 0.61
Ppp1r3eQ8BRJ4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ppp1r3eQ8BRJ4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ppp1r3eQ8BRJ4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ppp1r3eQ8BRJ4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ppp1r3eQ8BRJ4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ppp1r3eQ8BRJ4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ppp1r3eQ8BRJ4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ppp1r3eQ8BRJ4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ppp1r3eQ8BRJ4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ppp1r3eQ8BRJ4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ppp1r3eQ8BRJ4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.86■□□□□ 0.61
Ppp1r3eQ8BRJ4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ppp1r3eQ8BRJ4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ppp1r3eQ8BRJ4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ppp1r3eQ8BRJ4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ppp1r3eQ8BRJ4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ppp1r3eQ8BRJ4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ppp1r3eQ8BRJ4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ppp1r3eQ8BRJ4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ppp1r3eQ8BRJ4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.84■□□□□ 0.61
Ppp1r3eQ8BRJ4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ppp1r3eQ8BRJ4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ppp1r3eQ8BRJ4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ppp1r3eQ8BRJ4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Ppp1r3eQ8BRJ4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ppp1r3eQ8BRJ4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ppp1r3eQ8BRJ4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ppp1r3eQ8BRJ4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ppp1r3eQ8BRJ4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Ppp1r3eQ8BRJ4 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.83■□□□□ 0.61
Ppp1r3eQ8BRJ4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ppp1r3eQ8BRJ4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ppp1r3eQ8BRJ4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ppp1r3eQ8BRJ4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ppp1r3eQ8BRJ4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ppp1r3eQ8BRJ4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Ppp1r3eQ8BRJ4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ppp1r3eQ8BRJ4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ppp1r3eQ8BRJ4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.83■□□□□ 0.6
Ppp1r3eQ8BRJ4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ppp1r3eQ8BRJ4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ppp1r3eQ8BRJ4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ppp1r3eQ8BRJ4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ppp1r3eQ8BRJ4 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.82■□□□□ 0.6
Ppp1r3eQ8BRJ4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ppp1r3eQ8BRJ4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.82■□□□□ 0.6
Ppp1r3eQ8BRJ4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ppp1r3eQ8BRJ4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ppp1r3eQ8BRJ4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.82■□□□□ 0.6
Ppp1r3eQ8BRJ4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ppp1r3eQ8BRJ4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.82■□□□□ 0.6
Ppp1r3eQ8BRJ4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ppp1r3eQ8BRJ4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ppp1r3eQ8BRJ4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ppp1r3eQ8BRJ4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.81■□□□□ 0.6
Ppp1r3eQ8BRJ4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ppp1r3eQ8BRJ4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ppp1r3eQ8BRJ4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ppp1r3eQ8BRJ4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ppp1r3eQ8BRJ4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ppp1r3eQ8BRJ4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ppp1r3eQ8BRJ4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ppp1r3eQ8BRJ4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ppp1r3eQ8BRJ4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ppp1r3eQ8BRJ4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ppp1r3eQ8BRJ4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ppp1r3eQ8BRJ4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ppp1r3eQ8BRJ4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ppp1r3eQ8BRJ4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ppp1r3eQ8BRJ4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ppp1r3eQ8BRJ4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ppp1r3eQ8BRJ4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ppp1r3eQ8BRJ4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ppp1r3eQ8BRJ4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ppp1r3eQ8BRJ4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ppp1r3eQ8BRJ4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ppp1r3eQ8BRJ4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms