Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smco3Q8BQM7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smco3Q8BQM7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smco3Q8BQM7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smco3Q8BQM7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smco3Q8BQM7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Scarna2-201ENSMUST00000157560 414 ntBASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Gm16437-201ENSMUST00000025669 507 ntBASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smco3Q8BQM7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smco3Q8BQM7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smco3Q8BQM7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smco3Q8BQM7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smco3Q8BQM7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Smco3Q8BQM7 Gm9806-201ENSMUST00000051080 552 ntBASIC16.52■□□□□ 0.24
Smco3Q8BQM7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smco3Q8BQM7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smco3Q8BQM7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smco3Q8BQM7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Smco3Q8BQM7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Smco3Q8BQM7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.51■□□□□ 0.23
Smco3Q8BQM7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smco3Q8BQM7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smco3Q8BQM7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
Smco3Q8BQM7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.51■□□□□ 0.23
Smco3Q8BQM7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smco3Q8BQM7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smco3Q8BQM7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smco3Q8BQM7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smco3Q8BQM7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smco3Q8BQM7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smco3Q8BQM7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smco3Q8BQM7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.5■□□□□ 0.23
Smco3Q8BQM7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smco3Q8BQM7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smco3Q8BQM7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smco3Q8BQM7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smco3Q8BQM7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smco3Q8BQM7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smco3Q8BQM7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Smco3Q8BQM7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smco3Q8BQM7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smco3Q8BQM7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smco3Q8BQM7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Smco3Q8BQM7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smco3Q8BQM7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smco3Q8BQM7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smco3Q8BQM7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smco3Q8BQM7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.49■□□□□ 0.23
Smco3Q8BQM7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.49■□□□□ 0.23
Smco3Q8BQM7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Smco3Q8BQM7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smco3Q8BQM7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smco3Q8BQM7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smco3Q8BQM7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smco3Q8BQM7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smco3Q8BQM7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smco3Q8BQM7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smco3Q8BQM7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smco3Q8BQM7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smco3Q8BQM7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smco3Q8BQM7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smco3Q8BQM7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smco3Q8BQM7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.47■□□□□ 0.23
Smco3Q8BQM7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smco3Q8BQM7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smco3Q8BQM7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smco3Q8BQM7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smco3Q8BQM7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.47■□□□□ 0.23
Smco3Q8BQM7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.47■□□□□ 0.23
Smco3Q8BQM7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms