Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.61■□□□□ 0.41
Slc5a7Q8BGY9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc5a7Q8BGY9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc5a7Q8BGY9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 Gm6311-201ENSMUST00000073790 878 ntBASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc5a7Q8BGY9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc5a7Q8BGY9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Slc5a7Q8BGY9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc5a7Q8BGY9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc5a7Q8BGY9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc5a7Q8BGY9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc5a7Q8BGY9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc5a7Q8BGY9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc5a7Q8BGY9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc5a7Q8BGY9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc5a7Q8BGY9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc5a7Q8BGY9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc5a7Q8BGY9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc5a7Q8BGY9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc5a7Q8BGY9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc5a7Q8BGY9 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.58■□□□□ 0.41
Slc5a7Q8BGY9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc5a7Q8BGY9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc5a7Q8BGY9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Slc5a7Q8BGY9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc5a7Q8BGY9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc5a7Q8BGY9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc5a7Q8BGY9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc5a7Q8BGY9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.58■□□□□ 0.4
Slc5a7Q8BGY9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc5a7Q8BGY9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
Slc5a7Q8BGY9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.57■□□□□ 0.4
Slc5a7Q8BGY9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc5a7Q8BGY9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Slc5a7Q8BGY9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Slc5a7Q8BGY9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Slc5a7Q8BGY9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.57■□□□□ 0.4
Slc5a7Q8BGY9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc5a7Q8BGY9 Golph3-205ENSMUST00000228671 2842 ntBASIC17.57■□□□□ 0.4
Slc5a7Q8BGY9 Gm16437-201ENSMUST00000025669 507 ntBASIC17.57■□□□□ 0.4
Slc5a7Q8BGY9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Slc5a7Q8BGY9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc5a7Q8BGY9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Slc5a7Q8BGY9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc5a7Q8BGY9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc5a7Q8BGY9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc5a7Q8BGY9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Slc5a7Q8BGY9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc5a7Q8BGY9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc5a7Q8BGY9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Slc5a7Q8BGY9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc5a7Q8BGY9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc5a7Q8BGY9 Gm9806-201ENSMUST00000051080 552 ntBASIC17.56■□□□□ 0.4
Slc5a7Q8BGY9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc5a7Q8BGY9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc5a7Q8BGY9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc5a7Q8BGY9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc5a7Q8BGY9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc5a7Q8BGY9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc5a7Q8BGY9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc5a7Q8BGY9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc5a7Q8BGY9 Scarna2-201ENSMUST00000157560 414 ntBASIC17.55■□□□□ 0.4
Slc5a7Q8BGY9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Slc5a7Q8BGY9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc5a7Q8BGY9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Slc5a7Q8BGY9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc5a7Q8BGY9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc5a7Q8BGY9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc5a7Q8BGY9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slc5a7Q8BGY9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.54■□□□□ 0.4
Slc5a7Q8BGY9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc5a7Q8BGY9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.54■□□□□ 0.4
Slc5a7Q8BGY9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc5a7Q8BGY9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc5a7Q8BGY9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.53■□□□□ 0.4
Slc5a7Q8BGY9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc5a7Q8BGY9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc5a7Q8BGY9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Slc5a7Q8BGY9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc5a7Q8BGY9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Slc5a7Q8BGY9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc5a7Q8BGY9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc5a7Q8BGY9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc5a7Q8BGY9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc5a7Q8BGY9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc5a7Q8BGY9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms