Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Nrde2Q80XC6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nrde2Q80XC6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.35■□□□□ 0.85
Nrde2Q80XC6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.35■□□□□ 0.85
Nrde2Q80XC6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nrde2Q80XC6 Spcs1-204ENSMUST00000226782 949 ntBASIC20.35■□□□□ 0.85
Nrde2Q80XC6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nrde2Q80XC6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nrde2Q80XC6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.35■□□□□ 0.85
Nrde2Q80XC6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nrde2Q80XC6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nrde2Q80XC6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nrde2Q80XC6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Nrde2Q80XC6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Nrde2Q80XC6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nrde2Q80XC6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nrde2Q80XC6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nrde2Q80XC6 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.34■□□□□ 0.85
Nrde2Q80XC6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nrde2Q80XC6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nrde2Q80XC6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.34■□□□□ 0.85
Nrde2Q80XC6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nrde2Q80XC6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.33■□□□□ 0.85
Nrde2Q80XC6 Gm43530-201ENSMUST00000195920 274 ntBASIC20.33■□□□□ 0.85
Nrde2Q80XC6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Nrde2Q80XC6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nrde2Q80XC6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Nrde2Q80XC6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nrde2Q80XC6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Nrde2Q80XC6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nrde2Q80XC6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nrde2Q80XC6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Nrde2Q80XC6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.84
Nrde2Q80XC6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
Nrde2Q80XC6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Nrde2Q80XC6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nrde2Q80XC6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nrde2Q80XC6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Gm42642-201ENSMUST00000200683 355 ntBASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nrde2Q80XC6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nrde2Q80XC6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nrde2Q80XC6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nrde2Q80XC6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.3■□□□□ 0.84
Nrde2Q80XC6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nrde2Q80XC6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.3■□□□□ 0.84
Nrde2Q80XC6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nrde2Q80XC6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nrde2Q80XC6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nrde2Q80XC6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.3■□□□□ 0.84
Nrde2Q80XC6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nrde2Q80XC6 Gm27405-201ENSMUST00000184201 112 ntBASIC20.3■□□□□ 0.84
Nrde2Q80XC6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
Nrde2Q80XC6 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.3■□□□□ 0.84
Nrde2Q80XC6 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.3■□□□□ 0.84
Nrde2Q80XC6 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.3■□□□□ 0.84
Nrde2Q80XC6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nrde2Q80XC6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nrde2Q80XC6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.29■□□□□ 0.84
Nrde2Q80XC6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.29■□□□□ 0.84
Nrde2Q80XC6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nrde2Q80XC6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nrde2Q80XC6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nrde2Q80XC6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nrde2Q80XC6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nrde2Q80XC6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.28■□□□□ 0.84
Nrde2Q80XC6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.28■□□□□ 0.84
Nrde2Q80XC6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Nrde2Q80XC6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.28■□□□□ 0.84
Nrde2Q80XC6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nrde2Q80XC6 Gm40848-201ENSMUST00000221998 324 ntBASIC20.28■□□□□ 0.84
Nrde2Q80XC6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nrde2Q80XC6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Nrde2Q80XC6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nrde2Q80XC6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nrde2Q80XC6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Nrde2Q80XC6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nrde2Q80XC6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nrde2Q80XC6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nrde2Q80XC6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nrde2Q80XC6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nrde2Q80XC6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nrde2Q80XC6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nrde2Q80XC6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nrde2Q80XC6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nrde2Q80XC6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nrde2Q80XC6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms