Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RfflQ6ZQM0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RfflQ6ZQM0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RfflQ6ZQM0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RfflQ6ZQM0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RfflQ6ZQM0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RfflQ6ZQM0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RfflQ6ZQM0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.48■□□□□ 0.71
RfflQ6ZQM0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RfflQ6ZQM0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RfflQ6ZQM0 Gm6311-201ENSMUST00000073790 878 ntBASIC19.48■□□□□ 0.71
RfflQ6ZQM0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RfflQ6ZQM0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RfflQ6ZQM0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RfflQ6ZQM0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RfflQ6ZQM0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RfflQ6ZQM0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RfflQ6ZQM0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RfflQ6ZQM0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RfflQ6ZQM0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RfflQ6ZQM0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RfflQ6ZQM0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RfflQ6ZQM0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RfflQ6ZQM0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
RfflQ6ZQM0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RfflQ6ZQM0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RfflQ6ZQM0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RfflQ6ZQM0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RfflQ6ZQM0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RfflQ6ZQM0 Gm16437-201ENSMUST00000025669 507 ntBASIC19.46■□□□□ 0.71
RfflQ6ZQM0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RfflQ6ZQM0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RfflQ6ZQM0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RfflQ6ZQM0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RfflQ6ZQM0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RfflQ6ZQM0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RfflQ6ZQM0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RfflQ6ZQM0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RfflQ6ZQM0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RfflQ6ZQM0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RfflQ6ZQM0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RfflQ6ZQM0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.44■□□□□ 0.7
RfflQ6ZQM0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RfflQ6ZQM0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RfflQ6ZQM0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.44■□□□□ 0.7
RfflQ6ZQM0 Scarna2-201ENSMUST00000157560 414 ntBASIC19.44■□□□□ 0.7
RfflQ6ZQM0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RfflQ6ZQM0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RfflQ6ZQM0 Gm9806-201ENSMUST00000051080 552 ntBASIC19.44■□□□□ 0.7
RfflQ6ZQM0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RfflQ6ZQM0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RfflQ6ZQM0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RfflQ6ZQM0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RfflQ6ZQM0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RfflQ6ZQM0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RfflQ6ZQM0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RfflQ6ZQM0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RfflQ6ZQM0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.43■□□□□ 0.7
RfflQ6ZQM0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RfflQ6ZQM0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RfflQ6ZQM0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RfflQ6ZQM0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.42■□□□□ 0.7
RfflQ6ZQM0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RfflQ6ZQM0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RfflQ6ZQM0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RfflQ6ZQM0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RfflQ6ZQM0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RfflQ6ZQM0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RfflQ6ZQM0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RfflQ6ZQM0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
RfflQ6ZQM0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RfflQ6ZQM0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RfflQ6ZQM0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RfflQ6ZQM0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RfflQ6ZQM0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RfflQ6ZQM0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RfflQ6ZQM0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RfflQ6ZQM0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RfflQ6ZQM0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RfflQ6ZQM0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RfflQ6ZQM0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RfflQ6ZQM0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.41■□□□□ 0.7
RfflQ6ZQM0 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.41■□□□□ 0.7
RfflQ6ZQM0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RfflQ6ZQM0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RfflQ6ZQM0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RfflQ6ZQM0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RfflQ6ZQM0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.4■□□□□ 0.7
RfflQ6ZQM0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RfflQ6ZQM0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RfflQ6ZQM0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RfflQ6ZQM0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RfflQ6ZQM0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RfflQ6ZQM0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RfflQ6ZQM0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RfflQ6ZQM0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RfflQ6ZQM0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RfflQ6ZQM0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RfflQ6ZQM0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RfflQ6ZQM0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms