Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ssx9Q6XAS3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.06■□□□□ 0.8
Ssx9Q6XAS3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ssx9Q6XAS3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ssx9Q6XAS3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ssx9Q6XAS3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ssx9Q6XAS3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.06■□□□□ 0.8
Ssx9Q6XAS3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssx9Q6XAS3 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.05■□□□□ 0.8
Ssx9Q6XAS3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ssx9Q6XAS3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ssx9Q6XAS3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssx9Q6XAS3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssx9Q6XAS3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ssx9Q6XAS3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ssx9Q6XAS3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssx9Q6XAS3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssx9Q6XAS3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssx9Q6XAS3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ssx9Q6XAS3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssx9Q6XAS3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.04■□□□□ 0.8
Ssx9Q6XAS3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.04■□□□□ 0.8
Ssx9Q6XAS3 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.04■□□□□ 0.8
Ssx9Q6XAS3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssx9Q6XAS3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssx9Q6XAS3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.04■□□□□ 0.8
Ssx9Q6XAS3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.04■□□□□ 0.8
Ssx9Q6XAS3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssx9Q6XAS3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssx9Q6XAS3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssx9Q6XAS3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ssx9Q6XAS3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ssx9Q6XAS3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssx9Q6XAS3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssx9Q6XAS3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ssx9Q6XAS3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ssx9Q6XAS3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssx9Q6XAS3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssx9Q6XAS3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ssx9Q6XAS3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssx9Q6XAS3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ssx9Q6XAS3 Gm5812-201ENSMUST00000061073 957 ntBASIC20.02■□□□□ 0.8
Ssx9Q6XAS3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssx9Q6XAS3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssx9Q6XAS3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ssx9Q6XAS3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssx9Q6XAS3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Ssx9Q6XAS3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ssx9Q6XAS3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ssx9Q6XAS3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ssx9Q6XAS3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssx9Q6XAS3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssx9Q6XAS3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ssx9Q6XAS3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssx9Q6XAS3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.01■□□□□ 0.79
Ssx9Q6XAS3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssx9Q6XAS3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssx9Q6XAS3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssx9Q6XAS3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssx9Q6XAS3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ssx9Q6XAS3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ssx9Q6XAS3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ssx9Q6XAS3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssx9Q6XAS3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Ssx9Q6XAS3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssx9Q6XAS3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20■□□□□ 0.79
Ssx9Q6XAS3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20■□□□□ 0.79
Ssx9Q6XAS3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssx9Q6XAS3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssx9Q6XAS3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ssx9Q6XAS3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ssx9Q6XAS3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssx9Q6XAS3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssx9Q6XAS3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ssx9Q6XAS3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ssx9Q6XAS3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ssx9Q6XAS3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ssx9Q6XAS3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ssx9Q6XAS3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssx9Q6XAS3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.98■□□□□ 0.79
Ssx9Q6XAS3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssx9Q6XAS3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Ssx9Q6XAS3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssx9Q6XAS3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssx9Q6XAS3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ssx9Q6XAS3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssx9Q6XAS3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ssx9Q6XAS3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssx9Q6XAS3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssx9Q6XAS3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.97■□□□□ 0.79
Ssx9Q6XAS3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssx9Q6XAS3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssx9Q6XAS3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssx9Q6XAS3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ssx9Q6XAS3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ssx9Q6XAS3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ssx9Q6XAS3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ssx9Q6XAS3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ssx9Q6XAS3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ssx9Q6XAS3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms