Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgb4Q6P8W9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgb4Q6P8W9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgb4Q6P8W9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.99■□□□□ 0.95
Hmgb4Q6P8W9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgb4Q6P8W9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.99■□□□□ 0.95
Hmgb4Q6P8W9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgb4Q6P8W9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgb4Q6P8W9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgb4Q6P8W9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Hmgb4Q6P8W9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Hmgb4Q6P8W9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Hmgb4Q6P8W9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgb4Q6P8W9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgb4Q6P8W9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Hmgb4Q6P8W9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgb4Q6P8W9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgb4Q6P8W9 Gm8495-201ENSMUST00000188740 694 ntBASIC20.98■□□□□ 0.95
Hmgb4Q6P8W9 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.98■□□□□ 0.95
Hmgb4Q6P8W9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgb4Q6P8W9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Hmgb4Q6P8W9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.98■□□□□ 0.95
Hmgb4Q6P8W9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgb4Q6P8W9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgb4Q6P8W9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.98■□□□□ 0.95
Hmgb4Q6P8W9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgb4Q6P8W9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgb4Q6P8W9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgb4Q6P8W9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgb4Q6P8W9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgb4Q6P8W9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Hmgb4Q6P8W9 Gm18284-201ENSMUST00000172604 624 ntBASIC20.97■□□□□ 0.95
Hmgb4Q6P8W9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgb4Q6P8W9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgb4Q6P8W9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb4Q6P8W9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb4Q6P8W9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb4Q6P8W9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Hmgb4Q6P8W9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb4Q6P8W9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Hmgb4Q6P8W9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb4Q6P8W9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb4Q6P8W9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb4Q6P8W9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Hmgb4Q6P8W9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgb4Q6P8W9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgb4Q6P8W9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgb4Q6P8W9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.95■□□□□ 0.94
Hmgb4Q6P8W9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgb4Q6P8W9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgb4Q6P8W9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.95■□□□□ 0.94
Hmgb4Q6P8W9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
Hmgb4Q6P8W9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgb4Q6P8W9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Hmgb4Q6P8W9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgb4Q6P8W9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb4Q6P8W9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Hmgb4Q6P8W9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.94■□□□□ 0.94
Hmgb4Q6P8W9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
Hmgb4Q6P8W9 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.94■□□□□ 0.94
Hmgb4Q6P8W9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb4Q6P8W9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb4Q6P8W9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Hmgb4Q6P8W9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb4Q6P8W9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb4Q6P8W9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.93■□□□□ 0.94
Hmgb4Q6P8W9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb4Q6P8W9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb4Q6P8W9 Gm12251-201ENSMUST00000117893 792 ntBASIC20.93■□□□□ 0.94
Hmgb4Q6P8W9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb4Q6P8W9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb4Q6P8W9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb4Q6P8W9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb4Q6P8W9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Hmgb4Q6P8W9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb4Q6P8W9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb4Q6P8W9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb4Q6P8W9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb4Q6P8W9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb4Q6P8W9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb4Q6P8W9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb4Q6P8W9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb4Q6P8W9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
Hmgb4Q6P8W9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb4Q6P8W9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb4Q6P8W9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb4Q6P8W9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.92■□□□□ 0.94
Hmgb4Q6P8W9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb4Q6P8W9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Hmgb4Q6P8W9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb4Q6P8W9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb4Q6P8W9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.91■□□□□ 0.94
Hmgb4Q6P8W9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.91■□□□□ 0.94
Hmgb4Q6P8W9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgb4Q6P8W9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgb4Q6P8W9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgb4Q6P8W9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgb4Q6P8W9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgb4Q6P8W9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgb4Q6P8W9 Gm43530-201ENSMUST00000195920 274 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms