Protein–RNA interactions for Protein: Q64338

Pde1c, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde1cQ64338 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pde1cQ64338 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pde1cQ64338 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pde1cQ64338 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pde1cQ64338 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
Pde1cQ64338 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pde1cQ64338 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Pde1cQ64338 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pde1cQ64338 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pde1cQ64338 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pde1cQ64338 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pde1cQ64338 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pde1cQ64338 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pde1cQ64338 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pde1cQ64338 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pde1cQ64338 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pde1cQ64338 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pde1cQ64338 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pde1cQ64338 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pde1cQ64338 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Pde1cQ64338 Gm9847-201ENSMUST00000052528 599 ntBASIC21.87■■□□□ 1.09
Pde1cQ64338 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pde1cQ64338 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pde1cQ64338 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pde1cQ64338 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pde1cQ64338 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pde1cQ64338 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pde1cQ64338 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.86■■□□□ 1.09
Pde1cQ64338 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pde1cQ64338 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.86■■□□□ 1.09
Pde1cQ64338 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.86■■□□□ 1.09
Pde1cQ64338 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pde1cQ64338 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pde1cQ64338 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pde1cQ64338 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Pde1cQ64338 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pde1cQ64338 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pde1cQ64338 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pde1cQ64338 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pde1cQ64338 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.85■■□□□ 1.09
Pde1cQ64338 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
Pde1cQ64338 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pde1cQ64338 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pde1cQ64338 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.85■■□□□ 1.09
Pde1cQ64338 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pde1cQ64338 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pde1cQ64338 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pde1cQ64338 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pde1cQ64338 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.84■■□□□ 1.09
Pde1cQ64338 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pde1cQ64338 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.84■■□□□ 1.09
Pde1cQ64338 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.84■■□□□ 1.09
Pde1cQ64338 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pde1cQ64338 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Pde1cQ64338 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pde1cQ64338 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pde1cQ64338 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Pde1cQ64338 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pde1cQ64338 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Pde1cQ64338 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pde1cQ64338 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pde1cQ64338 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Pde1cQ64338 Gm12922-201ENSMUST00000120626 809 ntBASIC21.82■■□□□ 1.08
Pde1cQ64338 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Pde1cQ64338 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.82■■□□□ 1.08
Pde1cQ64338 Gm13241-201ENSMUST00000094493 780 ntBASIC21.82■■□□□ 1.08
Pde1cQ64338 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
Pde1cQ64338 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Pde1cQ64338 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pde1cQ64338 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pde1cQ64338 Golph3-202ENSMUST00000226517 2359 ntBASIC21.81■■□□□ 1.08
Pde1cQ64338 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pde1cQ64338 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pde1cQ64338 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Pde1cQ64338 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.81■■□□□ 1.08
Pde1cQ64338 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pde1cQ64338 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pde1cQ64338 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.8■■□□□ 1.08
Pde1cQ64338 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pde1cQ64338 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pde1cQ64338 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pde1cQ64338 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pde1cQ64338 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Pde1cQ64338 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pde1cQ64338 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pde1cQ64338 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.8■■□□□ 1.08
Pde1cQ64338 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pde1cQ64338 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pde1cQ64338 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pde1cQ64338 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pde1cQ64338 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Pde1cQ64338 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pde1cQ64338 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pde1cQ64338 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pde1cQ64338 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pde1cQ64338 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pde1cQ64338 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pde1cQ64338 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Pde1cQ64338 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pde1cQ64338 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms