Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 tN(GUU)FtN(GUU)F 74 nt6.42□□□□□ -1.38
UFD2P54860 tN(GUU)GtN(GUU)G 74 nt6.42□□□□□ -1.38
UFD2P54860 tN(GUU)KtN(GUU)K 74 nt6.42□□□□□ -1.38
UFD2P54860 tN(GUU)LtN(GUU)L 74 nt6.42□□□□□ -1.38
UFD2P54860 tN(GUU)N1tN(GUU)N1 74 nt6.42□□□□□ -1.38
UFD2P54860 tN(GUU)N2tN(GUU)N2 74 nt6.42□□□□□ -1.38
UFD2P54860 tN(GUU)O1tN(GUU)O1 74 nt6.42□□□□□ -1.38
UFD2P54860 tN(GUU)O2tN(GUU)O2 74 nt6.42□□□□□ -1.38
UFD2P54860 tN(GUU)PtN(GUU)P 74 nt6.42□□□□□ -1.38
UFD2P54860 HSX1tR(CCU)J 72 nt6.42□□□□□ -1.38
UFD2P54860 RPS0BYLR048W 759 nt6.42□□□□□ -1.38
UFD2P54860 YLR339CYLR339C 552 nt6.42□□□□□ -1.38
UFD2P54860 SNZ2YNL333W 897 nt6.42□□□□□ -1.38
UFD2P54860 ETT1YOR051C 1239 nt6.42□□□□□ -1.38
UFD2P54860 TGS1YPL157W 948 nt6.42□□□□□ -1.38
UFD2P54860 snR3snR3 194 nt6.42□□□□□ -1.38
UFD2P54860 HIR1YBL008W 2523 nt6.42□□□□□ -1.38
UFD2P54860 YIL067CYIL067C 2037 nt6.42□□□□□ -1.38
UFD2P54860 VPS5YOR069W 2028 nt6.42□□□□□ -1.38
UFD2P54860 ACF2YLR144C 2340 nt6.41□□□□□ -1.38
UFD2P54860 MID1YNL291C 1647 nt6.41□□□□□ -1.38
UFD2P54860 YCR097W-AYCR097W-A 267 nt6.41□□□□□ -1.38
UFD2P54860 snR83snR83 306 nt6.41□□□□□ -1.38
UFD2P54860 GIR2YDR152W 798 nt6.41□□□□□ -1.38
UFD2P54860 YFH7YFR007W 1062 nt6.41□□□□□ -1.38
UFD2P54860 YGR015CYGR015C 987 nt6.41□□□□□ -1.38
UFD2P54860 YGR176WYGR176W 348 nt6.41□□□□□ -1.38
UFD2P54860 RSM27YGR215W 333 nt6.41□□□□□ -1.38
UFD2P54860 SCEIQ0160 708 nt6.41□□□□□ -1.38
UFD2P54860 IST3YIR005W 447 nt6.41□□□□□ -1.38
UFD2P54860 BOS1YLR078C 735 nt6.41□□□□□ -1.38
UFD2P54860 MRPS17YMR188C 714 nt6.41□□□□□ -1.38
UFD2P54860 SEC17YBL050W 879 nt6.41□□□□□ -1.38
UFD2P54860 DAL82YNL314W 768 nt6.41□□□□□ -1.38
UFD2P54860 PIN2YOR104W 849 nt6.41□□□□□ -1.38
UFD2P54860 PNT1YOR266W 1272 nt6.41□□□□□ -1.38
UFD2P54860 CNS1YBR155W 1158 nt6.41□□□□□ -1.38
UFD2P54860 IME4YGL192W 1803 nt6.41□□□□□ -1.38
UFD2P54860 THI22YPR121W 1719 nt6.4□□□□□ -1.38
UFD2P54860 RPL7AYGL076C 735 nt6.4□□□□□ -1.38
UFD2P54860 YNL050CYNL050C 813 nt6.4□□□□□ -1.38
UFD2P54860 ELA1YNL230C 1140 nt6.4□□□□□ -1.38
UFD2P54860 PDR16YNL231C 1056 nt6.4□□□□□ -1.38
UFD2P54860 PLP2YOR281C 861 nt6.4□□□□□ -1.38
UFD2P54860 RPL7BYPL198W 735 nt6.4□□□□□ -1.38
UFD2P54860 BUD8YLR353W 1812 nt6.4□□□□□ -1.38
UFD2P54860 YAP1801YHR161C 1914 nt6.4□□□□□ -1.39
UFD2P54860 KEL1YHR158C 3495 nt6.39□□□□□ -1.39
UFD2P54860 QDR3YBR043C 2070 nt6.39□□□□□ -1.39
UFD2P54860 YDL034WYDL034W 345 nt6.39□□□□□ -1.39
UFD2P54860 COX26YDR119W-A 201 nt6.39□□□□□ -1.39
UFD2P54860 IRC22YEL001C 678 nt6.39□□□□□ -1.39
UFD2P54860 THI4YGR144W 981 nt6.39□□□□□ -1.39
UFD2P54860 SOL3YHR163W 750 nt6.39□□□□□ -1.39
UFD2P54860 AIM18YHR198C 966 nt6.39□□□□□ -1.39
UFD2P54860 PAU17YLL025W 375 nt6.39□□□□□ -1.39
UFD2P54860 YBR053CYBR053C 1077 nt6.39□□□□□ -1.39
UFD2P54860 YBR063CYBR063C 1215 nt6.39□□□□□ -1.39
UFD2P54860 SER3YER081W 1410 nt6.39□□□□□ -1.39
UFD2P54860 ATP1YBL099W 1638 nt6.39□□□□□ -1.39
UFD2P54860 RPN9YDR427W 1182 nt6.38□□□□□ -1.39
UFD2P54860 CWC23YGL128C 852 nt6.38□□□□□ -1.39
UFD2P54860 YGL214WYGL214W 486 nt6.38□□□□□ -1.39
UFD2P54860 SDS3YIL084C 984 nt6.38□□□□□ -1.39
UFD2P54860 PGU1YJR153W 1086 nt6.38□□□□□ -1.39
UFD2P54860 YML119WYML119W 1074 nt6.38□□□□□ -1.39
UFD2P54860 PGA3YML125C 939 nt6.38□□□□□ -1.39
UFD2P54860 PUT1YLR142W 1431 nt6.38□□□□□ -1.39
UFD2P54860 EKI1YDR147W 1605 nt6.38□□□□□ -1.39
UFD2P54860 HXT15YDL245C 1704 nt6.38□□□□□ -1.39
UFD2P54860 NSI1YDR026C 1713 nt6.38□□□□□ -1.39
UFD2P54860 SHE10YGL228W 1734 nt6.38□□□□□ -1.39
UFD2P54860 HXT16YJR158W 1704 nt6.38□□□□□ -1.39
UFD2P54860 GUA1YMR217W 1578 nt6.37□□□□□ -1.39
UFD2P54860 SPS2YDR522C 1509 nt6.37□□□□□ -1.39
UFD2P54860 RTT106YNL206C 1368 nt6.37□□□□□ -1.39
UFD2P54860 ARP2YDL029W 1176 nt6.37□□□□□ -1.39
UFD2P54860 KIN28YDL108W 921 nt6.37□□□□□ -1.39
UFD2P54860 SEH1YGL100W 1050 nt6.37□□□□□ -1.39
UFD2P54860 YGR149WYGR149W 1299 nt6.37□□□□□ -1.39
UFD2P54860 TFS1YLR178C 660 nt6.37□□□□□ -1.39
UFD2P54860 RIF2YLR453C 1188 nt6.37□□□□□ -1.39
UFD2P54860 DIM1YPL266W 957 nt6.37□□□□□ -1.39
UFD2P54860 LDH1YBR204C 1128 nt6.37□□□□□ -1.39
UFD2P54860 TRK2YKR050W 2670 nt6.37□□□□□ -1.39
UFD2P54860 TIP20YGL145W 2106 nt6.37□□□□□ -1.39
UFD2P54860 COM2YER130C 1332 nt6.36□□□□□ -1.39
UFD2P54860 QRI7YDL104C 1224 nt6.36□□□□□ -1.39
UFD2P54860 UBC1YDR177W 648 nt6.36□□□□□ -1.39
UFD2P54860 YIP5YGL161C 933 nt6.36□□□□□ -1.39
UFD2P54860 COS9YKL219W 1224 nt6.36□□□□□ -1.39
UFD2P54860 YLR222C-AYLR222C-A 231 nt6.36□□□□□ -1.39
UFD2P54860 SME1YOR159C 285 nt6.36□□□□□ -1.39
UFD2P54860 IFM1YOL023W 2031 nt6.35□□□□□ -1.39
UFD2P54860 MTC5YDR128W 3447 nt6.35□□□□□ -1.39
UFD2P54860 YFR034W-AYFR034W-A 288 nt6.35□□□□□ -1.39
UFD2P54860 RPL24BYGR148C 468 nt6.35□□□□□ -1.39
UFD2P54860 GAT3YLR013W 426 nt6.35□□□□□ -1.39
UFD2P54860 YBL096CYBL096C 309 nt6.35□□□□□ -1.39
UFD2P54860 YOR114WYOR114W 885 nt6.35□□□□□ -1.39
Retrieved 100 of 7,029 protein–RNA pairs in 22 ms