Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx4P53776 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx4P53776 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx4P53776 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lhx4P53776 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx4P53776 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx4P53776 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.91■□□□□ 0.3
Lhx4P53776 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Lhx4P53776 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx4P53776 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx4P53776 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx4P53776 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx4P53776 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx4P53776 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.91■□□□□ 0.3
Lhx4P53776 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx4P53776 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx4P53776 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx4P53776 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx4P53776 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx4P53776 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lhx4P53776 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx4P53776 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx4P53776 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx4P53776 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lhx4P53776 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.89■□□□□ 0.29
Lhx4P53776 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx4P53776 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx4P53776 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.89■□□□□ 0.29
Lhx4P53776 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx4P53776 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx4P53776 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Lhx4P53776 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx4P53776 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx4P53776 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.89■□□□□ 0.29
Lhx4P53776 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx4P53776 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx4P53776 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx4P53776 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx4P53776 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Lhx4P53776 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.88■□□□□ 0.29
Lhx4P53776 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx4P53776 Gm9847-201ENSMUST00000052528 599 ntBASIC16.88■□□□□ 0.29
Lhx4P53776 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Lhx4P53776 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.88■□□□□ 0.29
Lhx4P53776 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx4P53776 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx4P53776 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lhx4P53776 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx4P53776 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx4P53776 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx4P53776 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.87■□□□□ 0.29
Lhx4P53776 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx4P53776 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx4P53776 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Lhx4P53776 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx4P53776 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Lhx4P53776 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx4P53776 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx4P53776 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx4P53776 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx4P53776 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
Lhx4P53776 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx4P53776 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Lhx4P53776 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx4P53776 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx4P53776 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx4P53776 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx4P53776 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.85■□□□□ 0.29
Lhx4P53776 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.85■□□□□ 0.29
Lhx4P53776 Gm13241-201ENSMUST00000094493 780 ntBASIC16.85■□□□□ 0.29
Lhx4P53776 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx4P53776 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx4P53776 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx4P53776 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx4P53776 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx4P53776 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.85■□□□□ 0.29
Lhx4P53776 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.85■□□□□ 0.29
Lhx4P53776 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx4P53776 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx4P53776 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx4P53776 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx4P53776 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx4P53776 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx4P53776 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx4P53776 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx4P53776 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx4P53776 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx4P53776 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.84■□□□□ 0.29
Lhx4P53776 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.84■□□□□ 0.29
Lhx4P53776 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Lhx4P53776 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx4P53776 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx4P53776 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx4P53776 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lhx4P53776 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.83■□□□□ 0.29
Lhx4P53776 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.83■□□□□ 0.28
Lhx4P53776 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx4P53776 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.83■□□□□ 0.28
Lhx4P53776 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.83■□□□□ 0.28
Lhx4P53776 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms