Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lbx1P52955 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lbx1P52955 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Lbx1P52955 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.65■□□□□ 0.74
Lbx1P52955 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.65■□□□□ 0.74
Lbx1P52955 Gm21362-201ENSMUST00000194272 928 ntBASIC19.65■□□□□ 0.74
Lbx1P52955 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lbx1P52955 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lbx1P52955 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Lbx1P52955 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lbx1P52955 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Lbx1P52955 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.64■□□□□ 0.73
Lbx1P52955 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.64■□□□□ 0.73
Lbx1P52955 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.64■□□□□ 0.73
Lbx1P52955 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lbx1P52955 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.64■□□□□ 0.73
Lbx1P52955 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lbx1P52955 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lbx1P52955 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lbx1P52955 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lbx1P52955 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lbx1P52955 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.63■□□□□ 0.73
Lbx1P52955 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lbx1P52955 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lbx1P52955 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lbx1P52955 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lbx1P52955 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lbx1P52955 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lbx1P52955 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lbx1P52955 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lbx1P52955 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lbx1P52955 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lbx1P52955 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lbx1P52955 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Lbx1P52955 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lbx1P52955 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.62■□□□□ 0.73
Lbx1P52955 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.62■□□□□ 0.73
Lbx1P52955 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lbx1P52955 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lbx1P52955 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lbx1P52955 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lbx1P52955 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lbx1P52955 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lbx1P52955 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lbx1P52955 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.6■□□□□ 0.73
Lbx1P52955 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.6■□□□□ 0.73
Lbx1P52955 Gm18101-201ENSMUST00000215769 548 ntBASIC19.6■□□□□ 0.73
Lbx1P52955 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lbx1P52955 Gm715-201ENSMUST00000117865 831 ntBASIC19.59■□□□□ 0.73
Lbx1P52955 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lbx1P52955 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.59■□□□□ 0.73
Lbx1P52955 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lbx1P52955 Gm6365-201ENSMUST00000054711 744 ntBASIC19.59■□□□□ 0.73
Lbx1P52955 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lbx1P52955 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lbx1P52955 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lbx1P52955 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lbx1P52955 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lbx1P52955 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lbx1P52955 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Lbx1P52955 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lbx1P52955 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.58■□□□□ 0.72
Lbx1P52955 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.58■□□□□ 0.72
Lbx1P52955 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.58■□□□□ 0.72
Lbx1P52955 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Lbx1P52955 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lbx1P52955 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.58■□□□□ 0.72
Lbx1P52955 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lbx1P52955 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lbx1P52955 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lbx1P52955 Gm7290-201ENSMUST00000104990 617 ntBASIC19.57■□□□□ 0.72
Lbx1P52955 Gm12918-201ENSMUST00000120234 636 ntBASIC19.57■□□□□ 0.72
Lbx1P52955 Gm15710-201ENSMUST00000121821 636 ntBASIC19.57■□□□□ 0.72
Lbx1P52955 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Lbx1P52955 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lbx1P52955 Gm5075-201ENSMUST00000196916 622 ntBASIC19.57■□□□□ 0.72
Lbx1P52955 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lbx1P52955 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lbx1P52955 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.57■□□□□ 0.72
Lbx1P52955 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.57■□□□□ 0.72
Lbx1P52955 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lbx1P52955 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lbx1P52955 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lbx1P52955 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.56■□□□□ 0.72
Lbx1P52955 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lbx1P52955 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lbx1P52955 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lbx1P52955 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lbx1P52955 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lbx1P52955 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.56■□□□□ 0.72
Lbx1P52955 Gm9987-201ENSMUST00000069768 567 ntBASIC19.56■□□□□ 0.72
Lbx1P52955 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lbx1P52955 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lbx1P52955 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lbx1P52955 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Lbx1P52955 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.55■□□□□ 0.72
Lbx1P52955 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Lbx1P52955 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lbx1P52955 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lbx1P52955 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms