Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.52■□□□□ 0.88
Lhx3P50481 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx3P50481 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx3P50481 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx3P50481 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.52■□□□□ 0.88
Lhx3P50481 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx3P50481 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx3P50481 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx3P50481 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx3P50481 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx3P50481 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx3P50481 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx3P50481 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx3P50481 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx3P50481 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx3P50481 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx3P50481 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Lhx3P50481 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx3P50481 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx3P50481 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx3P50481 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx3P50481 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx3P50481 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.5■□□□□ 0.87
Lhx3P50481 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx3P50481 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx3P50481 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx3P50481 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx3P50481 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.49■□□□□ 0.87
Lhx3P50481 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx3P50481 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx3P50481 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx3P50481 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx3P50481 Gm12251-201ENSMUST00000117893 792 ntBASIC20.49■□□□□ 0.87
Lhx3P50481 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Lhx3P50481 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.49■□□□□ 0.87
Lhx3P50481 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx3P50481 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Lhx3P50481 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Lhx3P50481 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx3P50481 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx3P50481 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Lhx3P50481 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx3P50481 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx3P50481 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx3P50481 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx3P50481 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.47■□□□□ 0.87
Lhx3P50481 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx3P50481 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx3P50481 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.47■□□□□ 0.87
Lhx3P50481 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Lhx3P50481 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx3P50481 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx3P50481 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx3P50481 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx3P50481 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx3P50481 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx3P50481 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Lhx3P50481 Mir7075-201ENSMUST00000184187 82 ntBASIC20.46■□□□□ 0.87
Lhx3P50481 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Lhx3P50481 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx3P50481 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx3P50481 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lhx3P50481 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.45■□□□□ 0.86
Lhx3P50481 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.45■□□□□ 0.86
Lhx3P50481 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lhx3P50481 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Lhx3P50481 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Lhx3P50481 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lhx3P50481 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lhx3P50481 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.44■□□□□ 0.86
Lhx3P50481 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lhx3P50481 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lhx3P50481 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lhx3P50481 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lhx3P50481 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.44■□□□□ 0.86
Lhx3P50481 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lhx3P50481 Gm6139-201ENSMUST00000079261 882 ntBASIC20.44■□□□□ 0.86
Lhx3P50481 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Lhx3P50481 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lhx3P50481 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.44■□□□□ 0.86
Lhx3P50481 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Lhx3P50481 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lhx3P50481 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lhx3P50481 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.43■□□□□ 0.86
Lhx3P50481 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.43■□□□□ 0.86
Lhx3P50481 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Lhx3P50481 Spcs1-204ENSMUST00000226782 949 ntBASIC20.43■□□□□ 0.86
Lhx3P50481 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Lhx3P50481 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lhx3P50481 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lhx3P50481 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lhx3P50481 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.43■□□□□ 0.86
Lhx3P50481 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Lhx3P50481 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lhx3P50481 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Lhx3P50481 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.42■□□□□ 0.86
Lhx3P50481 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lhx3P50481 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lhx3P50481 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lhx3P50481 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms